Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00968 ATGAGACATTTGTTCCTTGGTCTTCTGGTTCTTTCGTGGATTTTGTCTATCCCAAGTACCCATGAACTACAAGTTGCCCAGACTCAAGTCTTGTTACAGATGAGGATGTATTTAGAGTACCCTGCTTCGCTGCAAAGTTGGGGAAATTATTATGGTGACCTCTGTAACATTTCTTCTTCTACACATATGAGCATTAAATGTCAAGATAACTCTGTATCTGAGCTTAATATTAGGGGAGACAAAACTTCGAAATCTGATGAGTTCAATGGATTTGCAATTCCTAATCAAACGCTGTCGATGAAATTCTCTATTGATTCTTTTATCACTACCTTAACGAGGTTGACTAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGAATTTGGGGTCCTCTTCCTGATAAGATTCATAGATTATCTCAGCTCGAAGTTCTGGACTTCAGCTCAAATTTCTTATTCGGTTCAATTCCACAGAAAATCTCCACTATGGTAAAGCTCAATACACTGAAACTCGACGACAATTATTTCAACGACACAATGCCTGACTGGTTTGATTCACTGTCTAATTTAGATGTCTTGAGTTTGAAAACCAACACCTTGCGGGGTTCATTCCCCTCGTCATTGCGCAAAATCAAGACCCTCACCGATATTTCGCTGTCTGGCAATGAATTATCTGGTAAATTACCTGATTTGAGCGTTCTCACCAGCCTACATGTACTGAATTTGAGAGAAAACCGTTTAGGTTCTGAACTACCATTGATGCCCTCGGGAGTGGTCACAGTTCTGCTAAGCAATAACTCATTTTCTGGGGTTATACCAAAGCAGTTCGGTGAATTGGGTCGGCTACAACATCTGGATCTGTCTGCAAATCATCTGAGTGGAATGCCTCCACCTTCCTTGTTCTCATTGCCAAGCATCAGTTACTTGAATTTAGGTAGCAATGTGCTTAGAGGGTCACTTCCAGATCAACTAAGTTGTGGCAGCAAACTTGGTTTTGTCGATATTTCTAGTAACAAAATAATTGGTGGACTTCCTTCTTGCTTGGTTAACACGTCTGATAGAAGAGTTGTCAAATATGATGGAAATTGCTTAACTCTCGATTCTCAAGATCAGCAGCCAGGGTCTAATTGTAAAGAATCCAATAAATCCATGGCTTGTAAAAAAACTGTAGCAGGGGCCATTGTTATTGGACTTGTTCTCGTCCTTGGGATTTCGGTATCAGGAGTTTTCTTTTGTAGAAAATGTCAGAGTAGAAAGAAAACTAAGCATCATTTGTTGCCAAATACTGTACAAGATAATTCCATTACAGGGTTTTCATCTCAACTCCTCGCAAATGCCAGGTTCATTTCTCATGCTGTAAAGCTAGGGGCACAAACTACTTCAATCTGTCGACCAATTTCAGTTGAAGAGTTGAAGGATGCCACAAGAGACTTTGACTTGTCAGCGTTTATCGGTGAAGGCTCCTTAGGAAAGCTATACAAAGGTAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTAGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTAGACTCACTCTCAAAGCTTCAGCATCCAAATTTAGTCAGCCTCTTGGGTTACTGTATTGATAGTGAACAAGATGATCCAACCACCAACAAGCTTCATCTTGTATATGAGTATGTGCCCAATGGGAGTTACCATGCCTATCTGTCAGAGTTTTCTCTAGAGAAGCCGCTCAAGTGGTCTGATAGATTGGCCATTTTAATTGGGGTTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTTAACAACCAATTGAAGGCAGACAATATTTTGCTTGATGAGCATCGATTTCCCAAATTAAGCGACTATGGAATGTCCATCCTCGGAGAAGAGGTTGAAAGGTTTGAGGCAAAGAGACAGGACACCAAATCAGGCCAAAGGGAATCATTTGAGGATGATGTTTATAACTTTGGATTCATATTGCTTGAATCACTTGTTGGACCCATAGCAAGCGGACAACGGGAAACCTTTTTTCTGAATGAGAAGGCATCCTTTGGAAGCCAAGATGGTAGAAGAAAAATTGTGGACCCCATAGTGTTGACATCTAGCTCTCAGGAGTCATTGTCGATCGTGATAGCTATAACAACCAAATGCATATCACCAGAACTTTCCTCTCAACCCTCATTTGAGGATGTCTTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATGCTGACCATAAATCAGAGTCTTCATCAGAATCTCAAGATTATAAGAGGGACAAAACGTGGGATTCAACTGGTCCACTCCTTTCTTCGACAAAGCAAATTATTAAACCCCAGAATCATCATCAGGATCCATAA 2388 0.4095 MRHLFLGLLVLSWILSIPSTHELQVAQTQVLLQMRMYLEYPASLQSWGNYYGDLCNISSSTHMSIKCQDNSVSELNIRGDKTSKSDEFNGFAIPNQTLSMKFSIDSFITTLTRLTSLRVLSLVSLGIWGPLPDKIHRLSQLEVLDFSSNFLFGSIPQKISTMVKLNTLKLDDNYFNDTMPDWFDSLSNLDVLSLKTNTLRGSFPSSLRKIKTLTDISLSGNELSGKLPDLSVLTSLHVLNLRENRLGSELPLMPSGVVTVLLSNNSFSGVIPKQFGELGRLQHLDLSANHLSGMPPPSLFSLPSISYLNLGSNVLRGSLPDQLSCGSKLGFVDISSNKIIGGLPSCLVNTSDRRVVKYDGNCLTLDSQDQQPGSNCKESNKSMACKKTVAGAIVIGLVLVLGISVSGVFFCRKCQSRKKTKHHLLPNTVQDNSITGFSSQLLANARFISHAVKLGAQTTSICRPISVEELKDATRDFDLSAFIGEGSLGKLYKGKLENGSYVAIRSLALSKKCSIQNLKARLDSLSKLQHPNLVSLLGYCIDSEQDDPTTNKLHLVYEYVPNGSYHAYLSEFSLEKPLKWSDRLAILIGVAKAVHFLHTGVIPGCFNNQLKADNILLDEHRFPKLSDYGMSILGEEVERFEAKRQDTKSGQRESFEDDVYNFGFILLESLVGPIASGQRETFFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIVIAITTKCISPELSSQPSFEDVLWNLQYAAQVQATADADHKSESSSESQDYKRDKTWDSTGPLLSSTKQIIKPQNHHQDP 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00968 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 440 559 - -
Accr11g00968 795 Gene3D Ribonuclease Inhibitor 258 383 IPR032675 -
Accr11g00968 795 Gene3D Ribonuclease Inhibitor 24 257 IPR032675 -
Accr11g00968 795 MobiDBLite consensus disorder prediction 755 772 - -
Accr11g00968 795 Gene3D Phosphorylase Kinase; domain 1 441 559 - -
Accr11g00968 795 SMART LRR_typ_2 138 162 IPR003591 -
Accr11g00968 795 SMART LRR_typ_2 278 302 IPR003591 -
Accr11g00968 795 SMART LRR_typ_2 233 256 IPR003591 -
Accr11g00968 795 MobiDBLite consensus disorder prediction 774 788 - -
Accr11g00968 795 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Accr11g00968 795 Pfam Leucine rich repeat 258 315 IPR001611 GO:0005515
Accr11g00968 795 Pfam Protein tyrosine and serine/threonine kinase 480 641 IPR001245 GO:0004672|GO:0006468
Accr11g00968 795 MobiDBLite consensus disorder prediction 750 795 - -
Accr11g00968 795 ProSiteProfiles Protein kinase domain profile. 477 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00968 795 Gene3D Transferase(Phosphotransferase) domain 1 560 770 - -
Accr11g00968 795 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 350 - -
Accr11g00968 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 257 381 - -
Accr11g00968 795 SUPERFAMILY L domain-like 111 364 - -
Accr11g00968 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 24 255 - -
Accr11g00968 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 760 - -
Accr11g00968 795 SUPERFAMILY Protein kinase-like (PK-like) 459 741 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00968 Accr-Chr11 19416510 19420251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00968 6 689 Miscellaneous Gene Families AT5G14210 56.857 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Accr11g00968 PK_Tyr_Ser-Thr 7.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00968 - - gmx:100799183 1060.06