Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00959 ATGAGGGAGAAGGGAGTGAATAGAGACATTCCATTTCTTCCCCAAGAAATCATCGGAAACATTCTTAAACGACTTCCGGCAAAAACCCTAATCCGATTCCAATGTGTGTGCAGAGAATGGAGAAATCTCTTCAGGACCAAATCGTTCATCGCCGATCACCTTGGCCACTCAAATCATCAAAACCCTTGTCTCCTTTTCCATTGTTATGAATGGTGTGATACTCGGAACTTGTATTGCCTTGATTCCGAGAAGCAAGTTTGGGAATTTCCGAAACCACCATTGCATGATTATCTGAAGCCATATAAGATCGTTGGTTCCTGCAATGGCTTGCTCTGTGTTCAAAGCAATGATTCTCATGTATCTCCTCATCCCCTTTTAGTGTGGAATCCCTCTATTAGAGAGGTCAGGCCTGTGCCCGCATTTAATTTTCATGAGGATTATGAGGATTATAATATAGGATTTGGTTTCAGCCCAATTATTAATGATTATAAGATAGTGATAGCTTCTCAGTGTTATACTGAGATTTCCGCTGTGCAAGTGTATTCTTTAATCTCAGGGTCATGGAGGGAAGTAAAATTTAGCCTCAATTGTACGGAATGTTTTAGTGATGAAAGCGTCACTGTTAATGGTATTATGTTTTGGTTGGGATCAAAGCGGGTTGGGAAAGATACAGATGACGATGAGGATCAGATTGTTTCATTTGACTTAGCAAATGAAGTGTTTACATCAATAGCAATACCCGAGCTACCCTGTTGGACAACGCTTACTGTGTATGAGGAAAAAGTTGCTCTTGTTTCTTGCATGATAAACTCAGGACTTTCTGTTGTTCATCTGTGGGTAATGGAGGAGGGTGTGCATGCATCTGGGGAGATATGGAGTTGGACTAAGAGATATACTAGCAACCCTTATCCATCCTGGTTATATCCACAGACAATTTGGAGAAATGAGATTGTTTGCACTGGTGACATCATTGAGAATAAACGAAGAGCTGTTCTCTTCAATCCCACTACTAAAAGAATCAAGAAGCATGTTATTAGCAAATGTGGCTGTTATCCTGATATTTTCAACTATGCTGAAAGTCTTGTCCCGGTTGGAGGAATGAAATCATTACAAATTTTCTGTATGGCTTCGACTCATTGA 1140 0.4026 MREKGVNRDIPFLPQEIIGNILKRLPAKTLIRFQCVCREWRNLFRTKSFIADHLGHSNHQNPCLLFHCYEWCDTRNLYCLDSEKQVWEFPKPPLHDYLKPYKIVGSCNGLLCVQSNDSHVSPHPLLVWNPSIREVRPVPAFNFHEDYEDYNIGFGFSPIINDYKIVIASQCYTEISAVQVYSLISGSWREVKFSLNCTECFSDESVTVNGIMFWLGSKRVGKDTDDDEDQIVSFDLANEVFTSIAIPELPCWTTLTVYEEKVALVSCMINSGLSVVHLWVMEEGVHASGEIWSWTKRYTSNPYPSWLYPQTIWRNEIVCTGDIIENKRRAVLFNPTTKRIKKHVISKCGCYPDIFNYAESLVPVGGMKSLQIFCMASTH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00959 379 Pfam F-box domain 13 48 IPR001810 GO:0005515
Accr11g00959 379 CDD F-box_AtFBW1-like 11 49 - -
Accr11g00959 379 Gene3D - 12 49 - -
Accr11g00959 379 SUPERFAMILY Galactose oxidase, central domain 77 342 IPR011043 -
Accr11g00959 379 SMART fbox_2 13 53 IPR001810 GO:0005515
Accr11g00959 379 NCBIfam F-box protein interaction domain 105 336 IPR017451 -
Accr11g00959 379 PANTHER BNAA05G37150D PROTEIN-RELATED 13 346 - -
Accr11g00959 379 ProSiteProfiles F-box domain profile. 7 53 IPR001810 GO:0005515
Accr11g00959 379 Pfam F-box associated domain 206 298 IPR013187 -
Accr11g00959 379 SUPERFAMILY F-box domain 10 75 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00959 Accr-Chr11 19247827 19248966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00959 144 332 Carbohydrate Esterase AT1G25141 25.373 3.26e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00959 - - pcin:129286166 417.157