Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00951 ATGGCACTCGTTGAGTTTTCATCGTCAAACCCTTTTGATGATTATGATCATTCAATTCCTCAAAATGACAATGGTGATCAATATAACCCACAACCAGATCATGAGCTATCGCCGAATGATCACATGCCAATGGGGATGACATTGTCTTTTGAGCCTCCATCATCAGACTCTTTTGATCCTGACATTGTTTATGTGGTTTCTCCAATACGTCAATGGCACCCACAAAATCCCTCCAATATCAATATCAACCAGAGAAAGCCAAGAAACACATGGACTGAGGAAGAACATAGGCTATTTTTGATTGGATTGCAAAGGTATAAGAAAGGAGATTGGAAGAACATTTCCAAAAATGTTGTGAAGACCAAGACATCAAAACAGGTTGCCAGCCATGGTGAAAAATTCTTTAAACGCCAAATTAATAAAGAGAACAAAAAGAGAAGAAAAAGCATCCATGACATCACTGATCCTTATTCTTTCCCAGAATCCCAGCATCAAAAACTCCCCTTATGTCAAAATTGA 519 0.3834 MALVEFSSSNPFDDYDHSIPQNDNGDQYNPQPDHELSPNDHMPMGMTLSFEPPSSDSFDPDIVYVVSPIRQWHPQNPSNININQRKPRNTWTEEEHRLFLIGLQRYKKGDWKNISKNVVKTKTSKQVASHGEKFFKRQINKENKKRRKSIHDITDPYSFPESQHQKLPLCQN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00951 172 Gene3D - 89 139 - -
Accr11g00951 172 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 138 IPR006447 GO:0003677
Accr11g00951 172 SMART sant 87 137 IPR001005 -
Accr11g00951 172 CDD SANT 90 130 IPR001005 -
Accr11g00951 172 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Accr11g00951 172 MobiDBLite consensus disorder prediction 1 46 - -
Accr11g00951 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Accr11g00951 172 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Accr11g00951 172 MobiDBLite consensus disorder prediction 142 172 - -
Accr11g00951 172 SUPERFAMILY Homeodomain-like 84 138 IPR009057 -
Accr11g00951 172 PANTHER TRANSCRIPTION FACTOR KUA1 83 157 - -
Accr11g00951 172 MobiDBLite consensus disorder prediction 156 172 - -
Accr11g00951 172 Pfam Myb-like DNA-binding domain 88 130 IPR001005 -
Accr11g00951 172 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00951 Accr-Chr11 19108336 19108963 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr11g00951 Myb_DNA-binding 5.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00951 - - qsa:O6P43_008757 99.7525