Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00902 348 CDD MADS 2 61 - -
Accr11g00902 348 SMART madsneu2 1 62 IPR002100 GO:0003677|GO:0046983
Accr11g00902 348 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 51 IPR002100 GO:0003677|GO:0046983
Accr11g00902 348 Coils Coil 153 173 - -
Accr11g00902 348 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
Accr11g00902 348 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 191 - -
Accr11g00902 348 MobiDBLite consensus disorder prediction 159 204 - -
Accr11g00902 348 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
Accr11g00902 348 MobiDBLite consensus disorder prediction 160 204 - -
Accr11g00902 348 Gene3D - 13 99 IPR036879 GO:0003677|GO:0046983
Accr11g00902 348 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr11g00902 348 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00902 Accr-Chr11 17609181 17611019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00902 1 147 Type I MADS-box Gene Family AT5G55690 35.762 1.57e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Accr11g00902 SRF-TF 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00902 - - pcin:129285084 342.043