Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00889 ATGTCTGATGAGCACAATAAGGAATTATACGACCGAGGCAGATCCACCATGTACTCATCATCGTTGTCTTATGATTCACAAGCTTTTGATCCTTCTTCTTACATGAGCTTAACCGAATATCTCCAAATAGGAACCATGGACTACAATTCACTCGCGACTTCATTTGGTCTCTCTGAGGTTTTGATTTCTTCTGCTGACCAACAAGGCAACACTCAGAAGCCATCATCAGGAGATATTGCAGACTGTGGTGTCGCCGGCGCCGGAGGTGAAACTCCACTACTCACCCAGAACTCATCTCTCTCTTCCTCTTGTTCTGAACCTGGCGCTGAAGAAGAAGATTCTGGAAAGAATACTGTAGTGGACGATCATAACCGAGCAAAAGGAGAAGAGGAAGCAGAAAAATCTAAGAAAGGGAAGAAAGGAAAGAAGAAAGGAGAGAAGAAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTTGAAGATGGTTACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGCTATTATAGGTGCACAACACAGAAGTGCACGGTGAAGAAACGAGTGGAGAGGTCGTTTGAGGATCCAACGACTGTGATAACAACGTACGAAGGTCAGCATAACCATCCTGTCCCCACTTCTCTCAGAGGGAACTATAATTCTGCAGCCATGTTCACGCCTTCTTCTTCTTCTTCTTCTTCGTCAACTTCCTCGTCCTCTTCCTTTCTCTCTCCTCTCATGATGATCCCAACCCTGCCATTTCCTCATCATCAAGACTTGCTTCGCCTTCATGGAGCCTCCAATAATATGAATAATAATTCTCTCTATTATTCTCACAACTATGCTAATCCTAACTCTGTTCATCAGTATCGTCATCATAATTATCATCATCAGGTTCCACTTCCTGATCAGCATCATGACAATGGCCTCCTTCAAGACTTAATCCCTTCTTCTATGTTCTTCAAACAAGAACCTCGAGAATGA 1023 0.435 MSDEHNKELYDRGRSTMYSSSLSYDSQAFDPSSYMSLTEYLQIGTMDYNSLATSFGLSEVLISSADQQGNTQKPSSGDIADCGVAGAGGETPLLTQNSSLSSSCSEPGAEEEDSGKNTVVDDHNRAKGEEEAEKSKKGKKGKKKGEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRGNYNSAAMFTPSSSSSSSSTSSSSSFLSPLMMIPTLPFPHHQDLLRLHGASNNMNNNSLYYSHNYANPNSVHQYRHHNYHHQVPLPDQHHDNGLLQDLIPSSMFFKQEPRE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00889 340 FunFam WRKY transcription factor 57 151 225 - -
Accr11g00889 340 MobiDBLite consensus disorder prediction 66 153 - -
Accr11g00889 340 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00889 340 SUPERFAMILY WRKY DNA-binding domain 157 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00889 340 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00889 340 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00889 340 MobiDBLite consensus disorder prediction 109 137 - -
Accr11g00889 340 MobiDBLite consensus disorder prediction 91 108 - -
Accr11g00889 340 Gene3D WRKY domain 132 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00889 340 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 249 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00889 Accr-Chr11 17481443 17483417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00889 28 338 WRKY Transcription Factor Family AT4G18170 46.106 4.22e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr11g00889 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00889 - - cave:132171212 283.108