Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00887 ATGTTTACTTTGATCTACAACATCGCGAAGAGGGCACGCGAACGAAAGGAAGAATCCGGCCATAAAAAACGTGATCCGACTTCCATTCCCTATATTGGCATACTATTTACACCCATGTTTGACGTAAATAAAGTAAAGAAAAAAAATGCTGCTGCTGCTAATTCAACCTCTGAATCCACCAATTTTAGCAAATTGGAAAAAGGGGAACGTATTGGGGCTGGTGCATTTGGGACTGTTTATGTTGCCCGCAACAGGAAAACCGGAGCCTTTTGCGCAGTTAAGGAGCTTAAAGACATTGACAAACCTGAATCCATACAAAAGGAAATCAAAATTCTCTCCCAACTGGAACATCCAAACATTGTAAAGTATTATGGCCATGAAGAAGATGGAAACAATATTTCTCTATACATGGAATTCATCGAAACAGGCTCACTGAAGAAATATGTGTCGAAACGAGGAGGTGCTTTACATGAAACTTTAATTCGAAAGTTCACAGCACAAATTCTTGCTGGCTTGGTTTACCTGCACAGCAAAAGAGTCGTTCACAGGGACTTAAAGCCGGACAATATACTTGTTGATTCTCAAGACATTATAAAGCTGGTCGACTTTGGTTTGTCTAAACATCTGGCAAAATCTGTGGACAATCACTCCAAGTTGGGAACTCCATATTTTGCGGCCCCAGAGGTTCTTAGAAAAGAAGAATATAATAGCTCGGAGGAAGCTTATGCTGCAGATATATGGAGTTTGGGTGGTGTGATCATTGAAATGTGTTCAGGGAAGCATCCTTGGCCTGATCATGAACCGCACCAGGCCTTTTATAAGGTTTCTGTTACAAATCAACCTCCGCCCATACCAGACGAGTTGTGCGAAGATGGTAAAGATTTTCTCAAACAGTGCTTCGGAATAACTCCAGCCGACCGCCCATCTGCTGAAATATTACAAAACCATCCCTTTCTAAAACCACAAAACTTGTCTTGCTGA 981 0.4149 MFTLIYNIAKRARERKEESGHKKRDPTSIPYIGILFTPMFDVNKVKKKNAAAANSTSESTNFSKLEKGERIGAGAFGTVYVARNRKTGAFCAVKELKDIDKPESIQKEIKILSQLEHPNIVKYYGHEEDGNNISLYMEFIETGSLKKYVSKRGGALHETLIRKFTAQILAGLVYLHSKRVVHRDLKPDNILVDSQDIIKLVDFGLSKHLAKSVDNHSKLGTPYFAAPEVLRKEEYNSSEEAYAADIWSLGGVIIEMCSGKHPWPDHEPHQAFYKVSVTNQPPPIPDELCEDGKDFLKQCFGITPADRPSAEILQNHPFLKPQNLSC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00887 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Accr11g00887 326 SMART serkin_6 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00887 326 Gene3D Transferase(Phosphotransferase) domain 1 40 322 - -
Accr11g00887 326 CDD STKc_MAPKKK 67 319 - -
Accr11g00887 326 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 52 323 - -
Accr11g00887 326 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Accr11g00887 326 SUPERFAMILY Protein kinase-like (PK-like) 63 323 IPR011009 -
Accr11g00887 326 PIRSF ILK 16 315 - -
Accr11g00887 326 ProSiteProfiles Protein kinase domain profile. 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00887 326 Pfam Protein kinase domain 66 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00887 Accr-Chr11 17366278 17368565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00887 63 320 MAP Kinase Kinase Kinase AT5G66850 45.318 1.92e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr11g00887 Pkinase 5.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00887 - - pcin:129285400 266.544