Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00881 ATGTTGCCTCTAACCGTAAAGAAAGAAGATGATGCTGCTGCTAATTCAATCTCTGAATCCACCAATTTTAGCAAATGGGAAAAAGGGGAACGTATTGGGGCTGGTGGATTTGGGACTGTTTATGTTGCCCGCAACAGAGAAACCGGAGCCTTATGCGCAATTAAGGAACTTAAAGACATTCACAAACCTGAAAACATGAAATCCCTACAAAAGGAAATCAAAATTCTCTCCCAACTGGAACATCCGAACATTGTAAAGTATTATGGCCATGAAGAAGATGGACACAAAATTTCTCTATACATGGAATTCATCGAATCAGGATCACTGAAGAAATATATATTGAAACGAGGTGCTTTACATGAAACTTTAATTCGAAAGTTCACAGCACAAATTCTCGCCGGGTTGGTTTACCTACACAGCGAAAGAGTAGTTCACAGGGACTTAAAGCCGGACAATATACTTGTCAATTTTGAAGACACTATAAAGCTAGTTGACTTTGGTTTGTCTAAGCATCTGGCAGAATCTGTGGGCAATCATTCTCTATGGGGAAATGCATATTATGCAGCCCCTGAGGCTCTTCGAAATACAAAATATAACAGCTTGCGTGAAGCTTCAGTTGCTGATATATGGAGTTTGGGTTGTGTAATCATTGAAATGTTGTCAGGAAAGCATCCTTGGCCTAATTGTGAAGAGCAGCAGGCCGGTTGGAATGTTGTTGGTAAAGGGCAATGTCCGTCGATACCAGACGAGTTGTGCAGCGAGGTTAAAGGTTTTCTCGAACTCTGCTTCATAAGGACTCCAGCCGGCCGCCCATCTGCTACAGAATTACAAGACCATCCCTTTGTAAAACCACAAAACTTGTCTTGCTGA 870 0.4172 MLPLTVKKEDDAAANSISESTNFSKWEKGERIGAGGFGTVYVARNRETGALCAIKELKDIHKPENMKSLQKEIKILSQLEHPNIVKYYGHEEDGHKISLYMEFIESGSLKKYILKRGALHETLIRKFTAQILAGLVYLHSERVVHRDLKPDNILVNFEDTIKLVDFGLSKHLAESVGNHSLWGNAYYAAPEALRNTKYNSLREASVADIWSLGCVIIEMLSGKHPWPNCEEQQAGWNVVGKGQCPSIPDELCSEVKGFLELCFIRTPAGRPSATELQDHPFVKPQNLSC 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00881 289 FunFam Maternal embryonic leucine zipper kinase 19 288 - -
Accr11g00881 289 CDD STKc_MAPKKK 25 282 - -
Accr11g00881 289 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Accr11g00881 289 FunFam Aurora kinase A 18 107 - -
Accr11g00881 289 PIRSF ILK 1 277 - -
Accr11g00881 289 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 286 - -
Accr11g00881 289 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00881 289 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00881 289 SMART serkin_6 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00881 289 Gene3D Transferase(Phosphotransferase) domain 1 18 288 - -
Accr11g00881 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Accr11g00881 289 SUPERFAMILY Protein kinase-like (PK-like) 23 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00881 Accr-Chr11 16977339 16979915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00881 24 283 MAP Kinase Kinase Kinase AT5G66850 46.067 4.06e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr11g00881 Pkinase 8.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00881 - - pcin:129285400 280.796