Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00860 ATGGCTGCCTCTACTATGGCTCTTTCTTCCTCATCTTTTGCCGGCAAGGCCGTTCCACTTCCTCCCTCCGCCATTGAGACTGGCCGCTTCTCCATGAGGAAGACCACCGCCAGGCCCACCAAAGCTGCCCCCTCTACAAGCCCGTGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCATCCTACTTGACTGGTGAGTTCCCTGGTGACTATGGTTGGGACACCGCCGGGCTCTCTGCTGACCCAGAGACCTTTGCCAGGAACCGTGAGCTTGAGGTCATTCACTCCAGGTGGGCTATGCTCGGAGCTTTGGGATGTGTCTTCCCTGAGCTCTTAGCTCGCAACGGTGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAAATCTTCAGCGAGGGCGGGCTTGACTATTTGGGCAACCCAAGCCTGATCCATGCACAGAGCATCCTTGCCATCTGGGCCTGCCAAGTGATCTTAATGGGAGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGTGAGGTTACTGACCCACTTTACCCCGGTGGAAGCTTTGACCCCTTGGGCTTGGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAGGAGATCAAGAACGGTAGGTTGGCTATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTGACCGGAAAAGGCCCATTGGAGAACCTTGCTGACCACCTTGCCGATCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTCCCTGGAAAGTGA 798 0.5576 MAASTMALSSSSFAGKAVPLPPSAIETGRFSMRKTTARPTKAAPSTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00860 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Accr11g00860 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Accr11g00860 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Accr11g00860 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Accr11g00860 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00860 Accr-Chr11 15929377 15934536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00860 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 87.732 9.91e-171 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00860 K08912 - sind:105175685 498.819