Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00847 ATGGATGCAACCATTGCTTTAACGCTCATAGAAGCTGTGCTGATTTTGTTGGCTATAGCAATTTCTAAAGCTATCACATTAATCTCTCCACTTGATGATAGTTCTAAAGATGTTGAATCGATTCCCACGGTTTCTTCTCCTTCTAATATCATTGTTGCTTCTCCTGCAACCAAGTATAACATCTTTCTTAGTTTTAGAGGTGAAGACACTCGTAACACTTTCTCAAGTTATCTCTATGAAGCACTTTGCAATGCAAACATTCATACATTTATGGATCACAAGCTCCACAAAGGAGATAATATCTCACCAATTTTGCTCAAAACAATTGAAGAATCAGATATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCCACGTGGTGTATGGATGAGCTCGTTCATATTATGAAATGTAAGGATCAATACGGAAGAATTGTCATCCCTATTTTCTACAACGTAGATCCATCCAGTGTTCGCAAACAAAATGGGAGTTTTGGAGATGGATTTGCTAAGCTTAAGCAGAGATTTAAGCACGACCAAGAAAGAGTGCAAGAGTGGAAAAATGCTTTGATGCGGTCAACAAATCTATCTGGATGGGATTCAAAGAATATTAGGCCTGAACCCAAACTAATCAAAATGATTGTCAAAGATATTTTGAGCAAATTGCATAACAAGTCATCGTTTCATTTGGAAGGATTAGTTGGGATTGATTATCATATTCAAAAAGTTGAAGGGTTACTAAGTGGAGCTCGCATTGTGGGAATATGGGGCATGGGTGGTATAGGCAAGACCACTCTTGCCAAAGCTGTATTTGATAGGTTGACGGCACAATTTGAATCTTTTTACTTTGCTAAAGGTGTAAGACAACAAGTAGAAAACAAAAGATTGGATGAATTACAGGAAAAATGCCTTAAAGAATTATTCAAAGATGAGGATATAAACACTTACAATTTAGGATCCACTTTTGTGAAGGAAAGGCTTCAACGCAAAAAAATTCTTTTGGTGCTTGATGATGTGGACGATGCTATAGCAATTGAAGATTTAATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACGAGCAAGTGCTTAAGAATACTTCTGTATTAATAACATATCATGTTCCACAATTGGATCACCATCATGCCTTTCATCTCTTTAGCTTGAAAGCTTTTAAGCAAGATGAGCCATTAAAAAGCTATTTGGAGTTATCAAAGTGGGTAGTGGACTATTGTGATGGAAATCCATTAGCCCTAACAGTACTGGGTTGCTTTCTTCATGGTAGAGGAAAAAAAGAGTGGGAAAGTGCTGTAGAAAAACTAAATCAAACTCTTCACAAGGACATTTTTAATGTGTTAAAATTGAGTTTTGATAGACTTGATGACACACAGAAGAATGTATTCCTTGATCTAGCATTTTTCTTGAACGAAGCATGGGGGATTTCTTTGGAAGATTGTACAAGATGCTTATATGATTCTTCTGCATATATTGAGCTAAGTGTACTTGAAGAGAGATCTCTCATTTTAGTGAGTGAAGAAGGTGATATTGAGATGCATGCTCTTTTAGTGGAAATGGGGCTTGAAATTTCAAGGCAACAATTCATGTCTAACCCTGAAAAACCCATTCGACTACAGAGGCACAAGGATATTTATCATGTATTCAACAATGACAAGGCAATTGAGGCAATTCGATGCATGTCTTTGGACGTGAGCAAGATAAAAAGTATTACATTGAAGGCTAGTACTTTTCAGAAGATATGTAACATAATATTTCTTAAAATTTACAAGTCTGATTCGAGAAAGCCTTCGATGTTGAATGTTCGTGGAGTTTTGGATTATCTTTCAGAAGAATTGAGGTTTTTGAGTTGGGAAGAATGTCCACTACCATATGTGCCATTACATTTTTGTGCGGAGAATCTAATTACACTTGAAATGCGTGATAGTAATATCCGACAACTTTGGAATGAAAATCAGCATTTTCCAAATTTACAGGAAATTGATTTATCACATTCAAAACATCTCACTGCATTGCCGGATCTCTCTCAGGCCCCTAAGATTAAAGCGTTGAATCTTAATGGTTGTGCAAATTTGGCTCAAATTCATTCTTTAACTTTCCCTGGAAAGGTTGTCAATTTAATTAGATATGATTGTGGGCCGATGCAGATAAAGGTTGGGGGCAATATAAAAGGGAGAAGTTCAGGGTTTGTGATTGTGCTTGGGTATTTGGATCTTCGCAATTTGTCATTCGACCAAGTGACAATGAAGTTGTTCGTATGTGGCAACATGATATGTGGTGTTAGATTGAAACATGAGGTAATGCCATTGGAAGAGAAAGAAGATTTGAGAAAGGAAGCACAAAGTTTGGGGTCTTTACTTCCATTTGTGAGGGAAGTTGAATGGTTTGAGGGTCCAATTGAGTTTGGGCATGATTTCAACCAACATTATCACTATTCTTTTAGTAAGGAGGAGAGGGGAGATAGAGGAGAAATGAATGGACATCAATTGATCACGATGTCATTAATGGAAGATGACGAAGAGGATGATGTGTTGATGGAAGGTGTTACATTCATAAGAGTTCCCAACAGCATCACTCGCTGGTCATTATTGAAGCAACTGAAATTAAAATCACCTCCACTCTCTGATGAATGTTGCAGAAAGATTAAACCTCGCTTAGGTGTAACACTCTCTTTCCCTGAAAATAATCCACCGTCCCCTTTACCTTGGCTGAGTCCCAGCAATAAATATGACACGATCCAACAACGTGGCTTCACATTTCCTTATCCTATTTACTTCAGCTGTGGGACACCTGATAGTATTTATGGCACCTTTATCGTTTGTTGTGGAGACATTTGGAGAGGAATAAATATTGTCAAGGCAATGCATTAG 2910 0.3715 MDATIALTLIEAVLILLAIAISKAITLISPLDDSSKDVESIPTVSSPSNIIVASPATKYNIFLSFRGEDTRNTFSSYLYEALCNANIHTFMDHKLHKGDNISPILLKTIEESDISLIIFSKDYASSTWCMDELVHIMKCKDQYGRIVIPIFYNVDPSSVRKQNGSFGDGFAKLKQRFKHDQERVQEWKNALMRSTNLSGWDSKNIRPEPKLIKMIVKDILSKLHNKSSFHLEGLVGIDYHIQKVEGLLSGARIVGIWGMGGIGKTTLAKAVFDRLTAQFESFYFAKGVRQQVENKRLDELQEKCLKELFKDEDINTYNLGSTFVKERLQRKKILLVLDDVDDAIAIEDLIKACGWFGEGSRIIITSRDEQVLKNTSVLITYHVPQLDHHHAFHLFSLKAFKQDEPLKSYLELSKWVVDYCDGNPLALTVLGCFLHGRGKKEWESAVEKLNQTLHKDIFNVLKLSFDRLDDTQKNVFLDLAFFLNEAWGISLEDCTRCLYDSSAYIELSVLEERSLILVSEEGDIEMHALLVEMGLEISRQQFMSNPEKPIRLQRHKDIYHVFNNDKAIEAIRCMSLDVSKIKSITLKASTFQKICNIIFLKIYKSDSRKPSMLNVRGVLDYLSEELRFLSWEECPLPYVPLHFCAENLITLEMRDSNIRQLWNENQHFPNLQEIDLSHSKHLTALPDLSQAPKIKALNLNGCANLAQIHSLTFPGKVVNLIRYDCGPMQIKVGGNIKGRSSGFVIVLGYLDLRNLSFDQVTMKLFVCGNMICGVRLKHEVMPLEEKEDLRKEAQSLGSLLPFVREVEWFEGPIEFGHDFNQHYHYSFSKEERGDRGEMNGHQLITMSLMEDDEEDDVLMEGVTFIRVPNSITRWSLLKQLKLKSPPLSDECCRKIKPRLGVTLSFPENNPPSPLPWLSPSNKYDTIQQRGFTFPYPIYFSCGTPDSIYGTFIVCCGDIWRGINIVKAMH 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00847 969 Pfam TIR domain 58 228 IPR000157 GO:0007165
Accr11g00847 969 ProSiteProfiles TIR domain profile. 57 223 IPR000157 GO:0007165
Accr11g00847 969 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 200 IPR035897 -
Accr11g00847 969 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 883 IPR044974 GO:0006952
Accr11g00847 969 FunFam Disease resistance protein (TIR-NBS-LRR class) 55 225 - -
Accr11g00847 969 SUPERFAMILY "Winged helix" DNA-binding domain 456 542 IPR036390 -
Accr11g00847 969 SUPERFAMILY L domain-like 571 757 - -
Accr11g00847 969 SMART till_3 58 197 IPR000157 GO:0007165
Accr11g00847 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 479 IPR027417 -
Accr11g00847 969 Gene3D - 385 469 IPR042197 -
Accr11g00847 969 Gene3D - 226 379 IPR027417 -
Accr11g00847 969 PRINTS Disease resistance protein signature 253 268 - -
Accr11g00847 969 PRINTS Disease resistance protein signature 666 682 - -
Accr11g00847 969 PRINTS Disease resistance protein signature 327 341 - -
Accr11g00847 969 PRINTS Disease resistance protein signature 420 434 - -
Accr11g00847 969 Pfam NB-ARC domain 239 455 IPR002182 GO:0043531
Accr11g00847 969 Gene3D - 53 225 IPR035897 -
Accr11g00847 969 Gene3D Ribonuclease Inhibitor 546 773 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00847 Accr-Chr11 15443781 15448238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00847 54 702 WRKY Transcription Factor Family AT4G12020 28.443 3.40e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00847 - - pcin:129286024 1026.93