Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00846 ATGATGCGCAAAGAAGCTTCATTGCTCCTATTGGGACTATCAATTTACAAAGCTATCAGATTCATATCTCATTTGCTTCATGGTAACCAACCTGATGCTGTTGATGAGAGTTCTCAAGATGATGTGATTTTAACTCAAACGGTTCCTCTTGCAACCAAGTATAACGTCTTCCTTAGCTTTAGAGGGGACACTCGCGACACTTTCTCACGTTATCTCTATGAAGCACTTTGCAATGCAAACATTCACACATTTATGGATCACAAGCTCCACAAAGGAGAGAATATCTCACCAATTCTTCTCAAAACAATAGAAGAATCACAGATATCTTTGATTATTTTCTCCAAAGAATATGCTTCTTCCACGTGGTGTATGAATGAGCTCATTCATATTATGAAATGTAAGAATCTATATGGAAGAACTGTCATCCCTATTTTCTACAATGTAGATCCATCCAATGTTCGCAAACAAAACGAGAGTTTTGGAGATGGATTTGCTAAGCTTAAGCAGAGATTTAAGCATGATGAAGAAAGAGTGCAGGAGTGGAAAAATGCTTTGAGGCAATCAACAAATCTATCTGGATGGGATTCAAAGAATATCAGGCTTGAACCCCAACTAATCAAAATGATTGTCAAAGACGTTTTGAGCAAGTTGCATAACAAGTCATCGTTTCATTTGGAAGGATTAGTTGGGATTGATTATCATATTCGAGAAGTTGAAGAGTTACTAAGTGAATCTCGCATTGTAGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCCAAAGCTGTATTTGACAGGTTGACGGCACAGTTTGAATCTTTCTACTTTGCTAAAGATGTAAGGCAACAAGTAGAAAGGAATGGATTGGATGAATTACAAGAGAAATGCCTTAAAGAATTATTCAAAGATGAGGATATTAACACTTATAATTTAGGATCCACTTTTGTGAAGGAAAGGCTTCACCGTAAAAAAATTCTTCTGGTGCTTGATGATGTGGACAGTGCTATAGCAATTGAAGATTTAATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACAATCAAGTGCTTAAGAATACTTTTGCATTTGTATATCATGTTCCACAATTGGATCCCGATCAAGCCTTTCATCTCTTTAGTTTGAAAGCTTTCAAGCAAAATGAGCCATCAAAAAACCAATTGGAGTTATCAAAGTGGGTAGTGGGCTATTGTGAAGGAAATCCATTAGCCCTAACAGTAATGGGTTACTTTTTTCAGGGTAGAGGAGAAGCGTGGAAAGGTGCTATGGAAAAACTAAATGAAACTATTCACGAGAAAATCTTTAATGTGTTGAAATTGAGTTTTGATAGACTTAATGACGCACAGAAGAATTTATTTCTTGATCTAGCATTTTTCTTGAAGGAACCATGGGGGATTTTTTTTGAACATTATGAGACAGATGTACTTAAAGAGAGATCCCTCATTTCAGTGAATAAATATGGTGGTATTGAGATGCATGCTCTTTTAGTGAAGATGGGGCTTGAAATTTCTAGGCAACAATTAATGTCTAATCCTGAAAAACCCATTCAACTACGGAGGCACCAGGATATTTATCATGTATTCAACAATGATAAGGGGATTGAGGCAATTCGATGTATGTCATTGGACGCAAGCAAGATAAAAAAGACTACATTGAGAGCTAGTGATTTTCGGAAGATGCGTGATTTAATATTCCTTAAAGTTTACAAGTCTGATAGGAAAGAGCCTTCAAAATTGAATATTTGTGAAGATTTGGATTATGTTTCAGAAGAACTAAAGTTTTTTATCTGGGAAGAATATCCACTATCATACGTGCCATTGCATTTCTGTGCGGAAAATCTTATTACACTTAAAATGTGTAATAGTAATATTCAACAACTTTGGAAAGGAAATCAGCATTTTCCAAATCTGAAGGAAATTTATTTAGTGGATTCGGAACATCTCACTGTATTGCCAGATCTCTCCCAGGCCCCTAAGATTAAATATTTATTTGTTAATCGTTGTGTGAATTTAGCTCAAATTCATTCTTCAACTTTCTCAAGAAAGCCTGTTGGTCTATACATGTATGGTTGTGGGCCAATGCAAATAAATGTTGGGGGCAGTATAAAAGGGAGAAATTCAAGGTTAGTGATTGTGTCCGGTTATTTAGATCTTCTCAATTTGTCATTCAACAAAGTGACGTGGAAGGTGTTCGTATGTGGCAACAGAATATGTGGTGTTAGATTCAAACATGTGGTAATGCCATTGAAAGAGATAGAAGAATTGAGAATCGGGACACAAAGTTTGGTGTCTTTACTTCCATTTGTGAGGACAGTTGAATGGTTTGAGCGTTCAATTGAGTTTGGGCATGATTTCAACCAACATTATCGTTATTGTTATAGTGAATTTAAGAGGAGAAATGCTGATAAGGTGGAGAGTAGTGATGAAGAGGAGAGAGGTGATAGAGGAGAAATGATGAATGAACGTCAAGTGGTGTCGATGTCATTAATGGAAGATGACGAAGAGGATGTGTTGATGGAGCATTGTTGTAGTGAGAGTGTTACATTTACAAGAATTCCCAACAGTATCACTCGCTGGTCATTATTGAAGGAATTGACATTAAAATCATTTCCAATCTCTAAACCTCTATTAGATGTAACACTCTCTTTCCCCGACATCATTTCACCATCCGTTTACTCTTATGTAGGTATTGGGTATGGCTCTCAACGTAACTTCACCTGTGGCGTTTCCGGTGGGTATCCTGATGGCATGTTAAAGGGTTCGGTGGGACATAAATTCGAACCAACTCATCTTTTAGTTGTTTGGGATAAAGGAAGGAGTTTTCCTGTGATGTTATGA 2883 0.3698 MMRKEASLLLLGLSIYKAIRFISHLLHGNQPDAVDESSQDDVILTQTVPLATKYNVFLSFRGDTRDTFSRYLYEALCNANIHTFMDHKLHKGENISPILLKTIEESQISLIIFSKEYASSTWCMNELIHIMKCKNLYGRTVIPIFYNVDPSNVRKQNESFGDGFAKLKQRFKHDEERVQEWKNALRQSTNLSGWDSKNIRLEPQLIKMIVKDVLSKLHNKSSFHLEGLVGIDYHIREVEELLSESRIVGIWGMGGIGKTTLAKAVFDRLTAQFESFYFAKDVRQQVERNGLDELQEKCLKELFKDEDINTYNLGSTFVKERLHRKKILLVLDDVDSAIAIEDLIKACGWFGEGSRIIITSRDNQVLKNTFAFVYHVPQLDPDQAFHLFSLKAFKQNEPSKNQLELSKWVVGYCEGNPLALTVMGYFFQGRGEAWKGAMEKLNETIHEKIFNVLKLSFDRLNDAQKNLFLDLAFFLKEPWGIFFEHYETDVLKERSLISVNKYGGIEMHALLVKMGLEISRQQLMSNPEKPIQLRRHQDIYHVFNNDKGIEAIRCMSLDASKIKKTTLRASDFRKMRDLIFLKVYKSDRKEPSKLNICEDLDYVSEELKFFIWEEYPLSYVPLHFCAENLITLKMCNSNIQQLWKGNQHFPNLKEIYLVDSEHLTVLPDLSQAPKIKYLFVNRCVNLAQIHSSTFSRKPVGLYMYGCGPMQINVGGSIKGRNSRLVIVSGYLDLLNLSFNKVTWKVFVCGNRICGVRFKHVVMPLKEIEELRIGTQSLVSLLPFVRTVEWFERSIEFGHDFNQHYRYCYSEFKRRNADKVESSDEEERGDRGEMMNERQVVSMSLMEDDEEDVLMEHCCSESVTFTRIPNSITRWSLLKELTLKSFPISKPLLDVTLSFPDIISPSVYSYVGIGYGSQRNFTCGVSGGYPDGMLKGSVGHKFEPTHLLVVWDKGRSFPVML 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00846 960 ProSiteProfiles TIR domain profile. 52 217 IPR000157 GO:0007165
Accr11g00846 960 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 884 IPR044974 GO:0006952
Accr11g00846 960 Gene3D - 378 461 IPR042197 -
Accr11g00846 960 SUPERFAMILY L domain-like 553 781 - -
Accr11g00846 960 Gene3D - 215 372 IPR027417 -
Accr11g00846 960 SMART till_3 53 191 IPR000157 GO:0007165
Accr11g00846 960 Pfam NB-ARC domain 233 449 IPR002182 GO:0043531
Accr11g00846 960 Pfam TIR domain 53 222 IPR000157 GO:0007165
Accr11g00846 960 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 194 IPR035897 -
Accr11g00846 960 PRINTS Disease resistance protein signature 413 427 - -
Accr11g00846 960 PRINTS Disease resistance protein signature 321 335 - -
Accr11g00846 960 PRINTS Disease resistance protein signature 247 262 - -
Accr11g00846 960 Gene3D Ribonuclease Inhibitor 537 707 IPR032675 -
Accr11g00846 960 FunFam Disease resistance protein (TIR-NBS-LRR class) 50 219 - -
Accr11g00846 960 SUPERFAMILY "Winged helix" DNA-binding domain 448 522 IPR036390 -
Accr11g00846 960 Coils Coil 164 184 - -
Accr11g00846 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 471 IPR027417 -
Accr11g00846 960 Pfam Leucine Rich Repeat 628 647 IPR011713 -
Accr11g00846 960 Gene3D - 51 214 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00846 Accr-Chr11 15384914 15389682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00846 54 710 WRKY Transcription Factor Family AT4G12020 27.843 2.80e-64 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00846 - - pcin:129286024 936.406