Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00845 ATGATGCGGAGAGAAGCTTCATTGCTCCTATTGGGATTGTCAATCTACAAAGCTATCAGATTCATATCTCACTTGCTTAATGGTAACCAACCTGGTGTTGTTGATGATAGTTCTCAAGATAATGTGATTTTAGCTCAAACGGCTTCTGCTTCTTCTTCTCATATTGTTGTTTCTCCTCCTGCTACAAAGTATGATGTATTCCTTAGCTTCAGAGGGGAAGACACCCACCACACTTTTGCAAGTTATCTTTACAAAGGACTTTGTAATGCAGACATTCACACTTTTATGGATTGCGAACTCCACAAAGAAGAACATATCTCACAAGTTCTTTTTAAGACAATAGAGAAGTCTGAAATATCGATGATTATTTTCTCCGAGAGTTATGCTTCTTCAGCATGGTGTTTGGATGAACTCGTTCACATATTGGAATGCAAGGAAAAATTTGGAAGGGTTGTAATACCTATTTTCTATAATATAGATCCTTCAAACCTACGCAAACAAAATGAGAGTTTTGAAAAAGGATTTAATGTATTAAAGAAAAGATTTAGCGACAACCTAGAAAAACTACAAAAGTGGAGTGATGCTTTATACAATGTTGCAAGTCTATCTGGATGGGATTCCAACACTACCAGATCTGACGTCGAACTTGTTGAAGAGATTGTCAAAGATATTTTGAGTAAGTTGAAGTATGAGTCATCATGTCGTGTTAAAGGACTTGTTGGTATTGCTCGTCATATGAAAAATGTTAAAAACCTTCTAACTGAGGCTCGCATTGTGGGAATATGGGGTATGGGTGGTGCTGGTAAAACCACTCTTGCTAAAGTTATATTTCAAGAGCTGAGAGCTCAATTTGATGTTTTCTCCTTTATTGAAAATGTCAAAGAGAAATTACAAGAAATTGGTCTGGACAAGTTACAACAACATTACCTCAAAAAATTATTAAAAGGTAAGGAGAATAGCGTCTATGACATAAAACCCACTGATGTCAAAAAAAAACTTGGAAGCAAAAAAATTCTTCTTATACTTGATGATGTGGATGATTCAAGAGTAGTTGAACATCTAACCAAATTGATTGATTGGGTTGGGGAAGGAAGTAGAGTTATTATCACATCAAGAGACATGCAAGTGCTTAGGAAAGCTTCTTCCTCTTCTACATATCATGTTCTAGGTTTGGAATTCTACAAGTACCTTCGTCACTTTAGTTTGAAAGCATTCAAACAACATGAGCCATTTGCAGGTTACATGGATTTATCTATATCAATGGTGAGATGTTGTCAAAGAAATCCATTAGCCTTGGACGTGTTGGGTTGCTTTCTCTATGGTAGAGGAAAAGAAGTGTGGGAAAGTACTTTGGAAAAACTAGACGAACATCCACCCAAGGACATTGTTGATATTTTGAAGTTGAGTTTTGATGGACTTGATGAGAAACAGCAAAATGTGTTTCTTGACCTAGCATTCCTAATCAAAGAAAGAGTTGATGTTTCTTTGAACCTAATAAGACAATTTTATGACTCTTGTGCACTTATTGAGATAACTTCTCTGGAAGAGAAATCCCTCATTTCATTTGCTCATCATGGTTCTATTGTGAGAAAGGAATCCCTCATTTCACATGATCATCATTGTCCTTTTGTGACAGAGGAATCCCTCATTTTATTTGATCATCATTGTTCTCTTGATGATTTTTCTATTGTGATGCACGATCTTGTGAAAAAAATGGGCCTTGAACTTGCTGAACAACAGTTATCATTTGCTAATCCTAGAACACTTGTTCGACTATGGAAGTATGAAGACATTGATTATTTTTTCAGTTGTGGCAAGAAGAATTGA 1827 0.3591 MMRREASLLLLGLSIYKAIRFISHLLNGNQPGVVDDSSQDNVILAQTASASSSHIVVSPPATKYDVFLSFRGEDTHHTFASYLYKGLCNADIHTFMDCELHKEEHISQVLFKTIEKSEISMIIFSESYASSAWCLDELVHILECKEKFGRVVIPIFYNIDPSNLRKQNESFEKGFNVLKKRFSDNLEKLQKWSDALYNVASLSGWDSNTTRSDVELVEEIVKDILSKLKYESSCRVKGLVGIARHMKNVKNLLTEARIVGIWGMGGAGKTTLAKVIFQELRAQFDVFSFIENVKEKLQEIGLDKLQQHYLKKLLKGKENSVYDIKPTDVKKKLGSKKILLILDDVDDSRVVEHLTKLIDWVGEGSRVIITSRDMQVLRKASSSSTYHVLGLEFYKYLRHFSLKAFKQHEPFAGYMDLSISMVRCCQRNPLALDVLGCFLYGRGKEVWESTLEKLDEHPPKDIVDILKLSFDGLDEKQQNVFLDLAFLIKERVDVSLNLIRQFYDSCALIEITSLEEKSLISFAHHGSIVRKESLISHDHHCPFVTEESLILFDHHCSLDDFSIVMHDLVKKMGLELAEQQLSFANPRTLVRLWKYEDIDYFFSCGKKN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00845 608 SUPERFAMILY Toll/Interleukin receptor TIR domain 59 205 IPR035897 -
Accr11g00845 608 SMART till_3 63 202 IPR000157 GO:0007165
Accr11g00845 608 FunFam Disease resistance protein (TIR-NBS-LRR class) 60 230 - -
Accr11g00845 608 ProSiteProfiles TIR domain profile. 62 228 IPR000157 GO:0007165
Accr11g00845 608 Gene3D - 395 474 IPR042197 -
Accr11g00845 608 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 599 IPR044974 GO:0006952
Accr11g00845 608 Pfam NB-ARC domain 245 460 IPR002182 GO:0043531
Accr11g00845 608 Gene3D - 61 230 IPR035897 -
Accr11g00845 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 484 IPR027417 -
Accr11g00845 608 SUPERFAMILY "Winged helix" DNA-binding domain 461 531 IPR036390 -
Accr11g00845 608 Gene3D - 231 387 IPR027417 -
Accr11g00845 608 PRINTS Disease resistance protein signature 258 273 - -
Accr11g00845 608 PRINTS Disease resistance protein signature 425 439 - -
Accr11g00845 608 PRINTS Disease resistance protein signature 332 346 - -
Accr11g00845 608 Pfam TIR domain 63 238 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00845 Accr-Chr11 15265503 15268639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00845 64 525 WRKY Transcription Factor Family AT4G12020 27.119 1.09e-39 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00845 - - pcin:129286024 574.704