Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00833 ATGAGTTGTTTCAGCTATTGTGAAGATGATGCACACCTCAAAGCGGCTGAGAGTGGAAGACCATACGTGGTTAAACACTCAACAGGAAATGATGGAAACTATCATGCTTCCGAAGCTGCAAAGCAGAGTGCTCAAACTGTAAGAGTCCAGCCCATTGAAGTTCCTACCATATCAGCAAGTGAATTAAACGAAATTGCAGATAATTTTGGGACAAATTCTCTGATTGGGGAGGGATCATATGGAAGAATATATTATGGCGTTCTTAAAAATAGTGTGGCTGCAACAATAAAGAAGTTGAAAGCTAGTAAACAACCTACTGATGAGTTTTTAGCCCAGTTTTCCATGGTGTCTGGGCTGAAGCATGAAAATTCTGTTCAACTACTTGGTTATTGTGTTGATGGAAGTTTCCATGTTCTAGCTTATGAGTTTGCATCTAATGGATCCCTTCACGATATTTTACATGGCAGAAAAGGTGTGAAGGGCGCCCAACCTAGTCCTGCCCTGTCATGGACACAGAGTGTAAAGGTTACCATAGGAGCTACAAAAGGGCTTGAGTACTCGCATGTTGCTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCTCGTTTCCATTTTTCTGCTCGTGAGGTGCATATTACCTGCTTGATAAATTGCTCTATCTCCCATTCTGTTTTTACCTTCACATGGACATCCAGAGAAGCCCTACTTACTAACTATCAGAATCGAATAGATTTGAAGAGCAGGTTGTGGGACTTCTTTGATAATAGTTCTATCAGAATTTGGATAAGCAATAATTATTGGGCTACTGATTTGCTTTGGGATGATTATGAAATGATGACAAGGAAGTTGAGCACAAGACCGAAGGGCATGCAACAAGATAGTTTTGCTGTTTCATGGATTTTGATTTGGGGTAAGCTTTGGAATTCCAAAAACCAAGGGTTAAACTTCAACTTCATTTATGATCCAGGCGGTGTTATTTCTATTTTTTTCCCCAAATACATCTTTCAATTTTGTCTCCTTCAAGACGTCATTTCTCTTGGGCTACTGTATATTTGTTTGGCAAAAAGTTTCACTTCTTGTGGAAAGGATAATTGCTTTTCTGTTTGGGCTGATTGCAGCAAAAAGATAGTTCAGTTGGGCGTCATCATTCTTGATCCGACAATAGTTACTATAACTTTTGAAATTGTTGGTGCTTCTTATGAATGGCATTGTGTTGCTCACCAGAATTTTGAGAATTACACATGTGTTGTGCTTGAAAGTATTATTAACGAGGGGATCTTATATGTTGCTTCATCACCATTGGTTGCAAGTTCTCTATATATTATATGGTTTACTTGGGTGTCTTACATTGATAACGGAAAAAATTGCCGTAGCTTTGTTAGGCTTCTGCTAGTCCACTCATGTTGGTTAGCTGCCGTTTTTGTGGACGTTACATTCCATGATGTTGGTGTCCTCATATGGTTTTCATTATGGATTTTAAACACGCATGGGCTCTTGAATTGTGGAGCTTGTCTTACTGGGAATCTATCACAGATTATATATACAACAAGTTGCCAAGTTCAAATACTTGTCCTTAATTGTCCTCATTTTCTGTCTCAACGAAAAGGAGAATTCCCATGCCATGGAACCAAGTTGAACACAGGTTTTGCTCAAGCTCTCCACATTCCATGGAAGAGGAATTACACAGCTGGAGAACTTTCCCTGGACCCGTTAATGCTAAAGCTCTGTCTCCCCAACTTAAGGACCAATAACATGACTCTCTGTGCAATTTTAATTGACAACCAGGTATTGATCATTTCTTGTCCCCTTTGGAAGCACAATCAACTATTTTGTATGAAGCTTTCCATTATCACCATCAAGCTGGTTGCTTCGTATTGGCTTGTCTCATCAATTTGCAATGGCCCAAAGGAGGATTTGGAGATGCAATTGTTTCAAGAATATTATGCCACTGTGCTTGCCAAGCTCACTACATATTTTGCTAAAGGATGGGGGTGTCCAACTGATGATACCTTGATTCGTCTTGAAGCTTATGTTCCTATTCCTGCTCATCTTATGTTGAGATTTGGAAACTATGAACCTATAGGCTTCGACATTTTTCATGTTCCACTGCACTTTTGCCTGCTGCACTGGGTTACTGGTCAGTTTAATATTATGACTTTGTCTCCTAACTTAGACCTTGAGGACAAGGTCTATTTTAATGGGGGGAGTAATGTAATGGTCATAAGGGATTTGGGCCAAGGTCATAAGGGATTTGGGCCAAGGTGGGAGCCCAATGGGAAGCCCAAACACAATAACAGTCAGCTTTGGCAGTGGAGACAATATATCATAGGTGAAAATGGTTATGGAAGGGTGTGA 2370 0.4004 MSCFSYCEDDAHLKAAESGRPYVVKHSTGNDGNYHASEAAKQSAQTVRVQPIEVPTISASELNEIADNFGTNSLIGEGSYGRIYYGVLKNSVAATIKKLKASKQPTDEFLAQFSMVSGLKHENSVQLLGYCVDGSFHVLAYEFASNGSLHDILHGRKGVKGAQPSPALSWTQSVKVTIGATKGLEYSHVAKIADFDLSNQAPDMAARFHFSAREVHITCLINCSISHSVFTFTWTSREALLTNYQNRIDLKSRLWDFFDNSSIRIWISNNYWATDLLWDDYEMMTRKLSTRPKGMQQDSFAVSWILIWGKLWNSKNQGLNFNFIYDPGGVISIFFPKYIFQFCLLQDVISLGLLYICLAKSFTSCGKDNCFSVWADCSKKIVQLGVIILDPTIVTITFEIVGASYEWHCVAHQNFENYTCVVLESIINEGILYVASSPLVASSLYIIWFTWVSYIDNGKNCRSFVRLLLVHSCWLAAVFVDVTFHDVGVLIWFSLWILNTHGLLNCGACLTGNLSQIIYTTSCQVQILVLNCPHFLSQRKGEFPCHGTKLNTGFAQALHIPWKRNYTAGELSLDPLMLKLCLPNLRTNNMTLCAILIDNQVLIISCPLWKHNQLFCMKLSIITIKLVASYWLVSSICNGPKEDLEMQLFQEYYATVLAKLTTYFAKGWGCPTDDTLIRLEAYVPIPAHLMLRFGNYEPIGFDIFHVPLHFCLLHWVTGQFNIMTLSPNLDLEDKVYFNGGSNVMVIRDLGQGHKGFGPRWEPNGKPKHNNSQLWQWRQYIIGENGYGRV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00833 789 Pfam Protein tyrosine and serine/threonine kinase 73 192 IPR001245 GO:0004672|GO:0006468
Accr11g00833 789 Gene3D Transferase(Phosphotransferase) domain 1 50 253 - -
Accr11g00833 789 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Accr11g00833 789 SUPERFAMILY Protein kinase-like (PK-like) 48 249 IPR011009 -
Accr11g00833 789 ProSiteProfiles Protein kinase domain profile. 69 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00833 789 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 8 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00833 Accr-Chr11 14809316 14811685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00833 58 202 Receptor kinase-like Gene Family AT5G01950 37.278 5.46e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Accr11g00833 PK_Tyr_Ser-Thr 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00833 K13436 - zju:107426175 317.39