Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00830 ATGGATGCAACCATTGCTTTAACGCTCATAGAAGCTGTGCTGATTTTGTTGGCTATAGCAATTTCTAAAGCTATCACATTAGTCTCCCCACTTGATGATAGTTGTAAAGATGTTGAGTCGATTCCTACGGTTTCTTCTCCTTCTAATATTATTGTTGCTCCTCATGCGACCAAGTATGACATCTTTCTTAACTTTAGAGGGGAAGACACTCGTGACACTTTCTCAAGTTATCTCTATGAAGCACTTTGCCATGCAAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATAATATCTCACCAATTCTTCTCAAAACAATAGAAGAATCAGAGATATCCTTGATTATTTTCTCGAAAGATTATGCTTCTTCCACGTGGTGTTTGGATGAGCTCGTTCATATTATGAAATGTAAGGATCAATACGGAAGAATTGTCATCCCTATTTTCTACAATGTAGATCCATCCAATGTTCGCAAACAAAATGGAAGTTTTGGAGATGGATTTGCTAAGCTTAAGCGGAGATTTAAGCACAACCAAGAAAGAGTGCAAGAGTGGAAAAATGCTTTGAGGCGATCAACAAATTTGTCTGGATGGGATTCAAAGAATATCAGGCCTGAACCCAAACTAATCAAAATGATTGTCAAAGACATTTTGAGCAAATTGAATGACAATTCATCCTTTCATTTGGAAGGGTTGGTTGGGATTGATTATCATATTCAAAAAATTGAAGAGTTGCTAAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCCAGTGCTGTATTTGACAAGTTGAAGGCACAGTTTGAAGCTTTCTACTTTGCTAAAGATGTAAGACAACAACTAGAAAAGAATGGATTGGATGAATTACAGGAAAAATGCTTTAAAGAATTATTAAAAGATGAGGATATTAACAATTACAATTTAAGATCCACTTTTGTGAGGAAAAGGCTTCACTGTAAAAAAATTCTTTTGGTGCTTGATGATGTGGATAATGTTATAGCAATTGAAGAATTAACCAAAGCATGTAGTTGGTTTGGGAAAGGAAGCAGAATTATTATCATATCAAGAGACATGCAAGTGCTTAAGAATACTTCTGCATCTGTAACATATCATGTTCCGCAACTAGATCCCCATCAAGCCTTTGATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATGAGCCATCAAAAAGATATTTGGAGTTATCAAAGTGGGTAGTGCACTATTGTGAAGGAAATCCATTAGCCTTAATAGTAATGGGTTGCTTTCTTCATGGTAGAGGAAAAGAAGAGTGGGAAAGTTCTATGAAAAAACTAAATCAAACTCTTCACAAGGACATTTTTACTGTGTTGAAATTGAGTTTTGATGGGCTTGATGATGCACAGAAGAATGTATTTCTCGATCTAGCATTTTTCTTGAATGAAGAATTGCAGATTAGTTTGGAAGATTGTACAAGATGCTTATATGACTCTTCTGCACTTATTGAGATATGTGTACTTGAAGAGAGATCTCTCATTTCAGTGAATAAAAATGGTTATATTGAGATGCATGCTCTTTTAGTAGAAATGGGGCTTGAAATTTCTAGGCAACAATTAATATCTAACCCTGAAAAACCCATTCGACTACAGAGACATCAAGATATTTATCATTTATTCAACAATGACAAGGGGATTGAGGCAATTCGATGTATATCATTGGACGCAAGCAAGATAAAAAAGACTACAATCAAAGCTCGTGATTTTCGAAAGATGCGTGATTTAATATTTTTTAAAGTTTACAAGTCTGATAGGAAAGAGCCTTCAAGATTGAATATTTGTGGAGATTTGGATTATGTTCCAGAACAACTAAGGTTTTTTAGTTGGGAAGAATATCCACTATCATATGTGCCTGTACATTTTTGTGCAGAGAATCTAATTACACTTGAAATGCCTAATAGCAATATCCAACAATTTTTCGATGGAAATCAGCATTTTCCAAATCTAAAGAAAATTGTTTTATCGTATTCAAAACATCTCATAGCACTCCCAGAGCTCTCTCATGCCCCTAAGATTGAATATGTGACACTTAATGGTTGTGTGAATTTGGCTCAAATCCATTCTTCAACTTTGCCGGAAAAGGAAGTCCAATTTTCTATAGAGAACAGTGAACCAGTGCAGATGAACATTGGGGGCAGTGTTGAAGGGACAAGTTCAGGGTTAGTGATTGTGTACAATTATTTAAATCGTGCCAATTGGTCATTCAATAAAATGACAACGAAGCTTTTTGTATCTGGCGAGAACATCTTTAGCGTTGGAGTGAAACATGTGGTAATGCCATTGGCAGCAGAGAAAGCAGAATTGGGAGTGGCGTTACAGAGTTTAGGGTCTCTACTTCCATTTGTGGGGCAAGTTGAATGGTTAGAGAGTGCAGTTGAGTTTGGGGATGATTTCAACCAGTATTATACTTATAACTATTATGGTGATTATTGGGTGACGAAGGTGTGGGATGAAGAAGAGGATGATGAGTTAATAATGGCATATTGTTATAGTAACAGTGCTCCATTAATGGAAGTTGAAGAAGAGGATGATGAGTTAATAATGGAATATTGTAGTAACAGTGCTAATATATTGACAAGAGTTCCAAATAGTGTCACTCGTTGGTCATTATTAAGACGACTGAGATTAAAGGAGAGTGATATTATTGGTAATGCAGGTAGCACCATTGCTCAAGTCTCAATTCTCAAAGCACTTATCGCACTCTCTCATCATGATTATTGCAGAAGAATTAACCCTCACTTAGATGTAGTACGGTCTTTTGACTCCCTGAGGTCCGCTTCACGTGGTGATTGTTTCCGTGTCTATTATAGGGTGGATGTGAACCATTCTTCGTTTCCTTATCAAGTTACCAATTGTTTAAATCTTCACTATGAGGGTGGCAACTTATGGGTTAATTATGGGGAGTGGATACCAGCACTCCAATATCGTACAATTTCGGTTTCAAGGAAGCTGGGTTAG 3024 0.3664 MDATIALTLIEAVLILLAIAISKAITLVSPLDDSCKDVESIPTVSSPSNIIVAPHATKYDIFLNFRGEDTRDTFSSYLYEALCHANIHTFMDHKLHKGDNISPILLKTIEESEISLIIFSKDYASSTWCLDELVHIMKCKDQYGRIVIPIFYNVDPSNVRKQNGSFGDGFAKLKRRFKHNQERVQEWKNALRRSTNLSGWDSKNIRPEPKLIKMIVKDILSKLNDNSSFHLEGLVGIDYHIQKIEELLSEARIVGIWGMGGIGKTTLASAVFDKLKAQFEAFYFAKDVRQQLEKNGLDELQEKCFKELLKDEDINNYNLRSTFVRKRLHCKKILLVLDDVDNVIAIEELTKACSWFGKGSRIIIISRDMQVLKNTSASVTYHVPQLDPHQAFDLFSLKAFKQNEPSKRYLELSKWVVHYCEGNPLALIVMGCFLHGRGKEEWESSMKKLNQTLHKDIFTVLKLSFDGLDDAQKNVFLDLAFFLNEELQISLEDCTRCLYDSSALIEICVLEERSLISVNKNGYIEMHALLVEMGLEISRQQLISNPEKPIRLQRHQDIYHLFNNDKGIEAIRCISLDASKIKKTTIKARDFRKMRDLIFFKVYKSDRKEPSRLNICGDLDYVPEQLRFFSWEEYPLSYVPVHFCAENLITLEMPNSNIQQFFDGNQHFPNLKKIVLSYSKHLIALPELSHAPKIEYVTLNGCVNLAQIHSSTLPEKEVQFSIENSEPVQMNIGGSVEGTSSGLVIVYNYLNRANWSFNKMTTKLFVSGENIFSVGVKHVVMPLAAEKAELGVALQSLGSLLPFVGQVEWLESAVEFGDDFNQYYTYNYYGDYWVTKVWDEEEDDELIMAYCYSNSAPLMEVEEEDDELIMEYCSNSANILTRVPNSVTRWSLLRRLRLKESDIIGNAGSTIAQVSILKALIALSHHDYCRRINPHLDVVRSFDSLRSASRGDCFRVYYRVDVNHSSFPYQVTNCLNLHYEGGNLWVNYGEWIPALQYRTISVSRKLG 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00830 1007 ProSiteProfiles TIR domain profile. 57 223 IPR000157 GO:0007165
Accr11g00830 1007 Pfam NB-ARC domain 238 455 IPR002182 GO:0043531
Accr11g00830 1007 SUPERFAMILY L domain-like 573 900 - -
Accr11g00830 1007 SMART till_3 58 197 IPR000157 GO:0007165
Accr11g00830 1007 Gene3D - 54 225 IPR035897 -
Accr11g00830 1007 FunFam Disease resistance protein (TIR-NBS-LRR class) 55 225 - -
Accr11g00830 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 200 IPR035897 -
Accr11g00830 1007 Gene3D Ribonuclease Inhibitor 557 724 IPR032675 -
Accr11g00830 1007 Gene3D - 385 469 IPR042197 -
Accr11g00830 1007 PRINTS Disease resistance protein signature 420 434 - -
Accr11g00830 1007 PRINTS Disease resistance protein signature 327 341 - -
Accr11g00830 1007 PRINTS Disease resistance protein signature 253 268 - -
Accr11g00830 1007 PRINTS Disease resistance protein signature 666 682 - -
Accr11g00830 1007 Pfam TIR domain 58 227 IPR000157 GO:0007165
Accr11g00830 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 479 IPR027417 -
Accr11g00830 1007 SUPERFAMILY "Winged helix" DNA-binding domain 456 541 IPR036390 -
Accr11g00830 1007 Gene3D - 226 381 IPR027417 -
Accr11g00830 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 896 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00830 Accr-Chr11 14702240 14709043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00830 59 702 WRKY Transcription Factor Family AT4G12020 28.959 7.60e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00830 - - pcin:129286024 1033.48