Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00829 ATGGGTGTAACCGTTGCTTTAACGCTCATAGAGGCTTTGTTGATCTTATTGGCTATAGCAACTAATAAAGCTACCAGATTTATGTTTCCCTCACCTCATGAAAACCATCCTGCTGCTGCTGATAAGAGTTGTGAAGGCGATGCTGTTTCAATTTCAACAGTTTCTTTGCATTCTTCTCATATTGTTGCTGATGCTCATCCAACTACCAAGTATGATGTATTCCTTAGCTTCAGAGGAGAAGACACTCGCAACAATTTTGCAAGTTATCTTTATGAAGCACTCTGCAAAGCAAACATTCAAACTTTTATGGATCACAAACTCCACAAAGGAGAAGATATCTCGCCGGTTCTTTTAAGAATCATTGAAGAATCAGAGATATCTGTGATTATCTTTTCTACAGATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTGTTCACATATTAGAATGCAAGAAAAAATTTGGAAGGGTTGTGATTCCTATTTTCTACAAAATTGATCCATCAAATGTCAGCAAACAGAGTGGGAGCTTTGGAGATGGATTTGCTAAACTGAAGCAAAGATTTAAAGACAACCCAAACAAATTACAGAACTGGATAGATGCTTTGTCCCAATCAACAAGCCTTTCTTCTAGATGGGATTCCAAGAATATCAGGCCTGAGTCCAAACTCATTAAAAAGATTGTCGAAGATATCTTGAGCAAACTGAACTACTGTACATCATCATCATTTCATCTTGAAGGACTTGTGGGCATTAATGATAAAATTGAGAAAATTGAAGAACTATTGATTCATGCTCGAATTGTGGGAATATGGGGCATGGGTGGTATAGGTAAGACCACACTTGCCAAAGCTACACTCCACAATTTGAAAGCACAATTTGAAGCTTCCTCTTTTGTTGGAAATGTAAGGGAACAACTAGCAAGAGTTGGACTGAACAAATTAATGGTAGAATGTCTCAAAGAATTATTAAAAGATGAGGGCCTTCACGTCTACAACATGAAATCCACTTTTGTGAAACGTAGGCTTCAATGCAAAAAAATTCTTTTGATACTTGATGATGTGGACAATTTATTAACAGCTGAAGATTTAACCAAATTGTTTGACTGGTTTGGAGAAGGAAGTAGAATTATTGTTACCTCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCATCTGCAACATATCATGTTGAGAAGCTAAAGTTCTATCATGCTCTTCATCTCTTTAGTTTGAAAGCATTTAAGCAAAATGAGCCATTTAAAAGCTATTTGAAGTTATCAAATTTGGTGGTTGGTTATTGTCAAGGAAACCCATTAGCTCTTGTAGTGTTGGGTTGCTTTCTTTATGGTAGAACAAAGCAAGAGTGGGAAAGTGCATTGGAAAAATTAAAACAAGCTCCACATAAGGACATTTTCATTGTGCTCAAATTGAGTTTTGATGGACTTGATGAGAAGCAAAAGAACGTGTTCCTTGACTTGGCACATTTATCAAGGGAAACAATTTATAATATTAATATTTCTTTAAACAATATAAGAGGCTTCTATGACTTCTCTACATATATCGAGATAAGTGTTCTCAAAGAAAGATCTCTCATTTCGATTGATCGATTTGGTGGAATTGATATGCATGATCTTGTAAGAGAAATGGGCGAAGAAATTTGTAGACAACAATTGAATGTTGATCCTGAAAGACCTATTCGACTTTCGAATCACAATGATGTTTATCATTTTTTCGTCAATAAGAAGGGGAGTGGGACAATTCGATGCATATCTTTGGATACATGCAAGACAAAAGAGATAAAATTGCAGGCTAATGCCTTCAAAAAGATGAAGGGATTGAAATCTTTGAAGTTTTACAGGTCTGATTTTAAAGAGCCTTCAAAAGTGTATATTTCTGAAGCTCTTGATAATCTTCCTGAAGAGTTGAGGTTTTTCTTTTGGGAAGATTATCCTCTACCATCTGTGCCATTGAGCTTTTGTGCAGAGAATCTTGTAGAACTTGAAATGCCTCATAATGATCTCCAGCAACTTTGGGATGCAGATCAGCATTTCCCAAATTTAGGAGTAATGAATTTAATTGCCTCAAAACATCTGATTGAGCTTCCAAATCTCTCTGGAGCCCCCAACCTGAGTGTGATATATCTTGATGAATGTGTGAATTTGACTCAAATTTATTCTTCAAGGAGCCTGAGCAAGCTTTCAATTCTAGCCATACGAGATTGCACAGACCTAAGACGTATAAACATTGGAGGCAATGTTAAGGAGGGAGATTCAGGGTTAGTAGCCGTCTACAATTTTCTGGATCTTATCAACTCGTCTTTCTACAAATTGACTGTGAAGCTCTTCATCTCAAACGACGGCAATAATGTCTCTGGGTTTCGGGTTAAGCTTGTGAGAGTATTTTTCTCAGAGATATTATCAGATCAGTGCATGAACAATTTTGAGAGTTCAAAGTCAAATTTGTTGTCTTTACTTCCATTTGTTACTTCACCTCGCTGGTCAGATCTTATTGAGTTTGGTAATTTCAAAGAACATTTCCACTTACATTCTCATCATGAAGAGATTACCAGAAACAATTCCAAAGAAGTATTCAATGAACTCATAGCAATGGCGAGAAAGCCATTGGAGCCTGAAGAAAAGATGATAACAAAGGAGGTAAACAGAGATTATATTTCTTATCATGGTAAACGGAAGCCATTTGAGAGCGAAGAAGAGACGATGACAGAAATGGAATGTTATTGTAGCAGTACTGGTAATAGATTAACAAGAGTTCCTAATGGCATCACACGCTGGGCATTATTGACACAAGTGACACTACAGAAAAGTGATATTACCGAGTGTGAAATTTGGAACAATCCTGGGATTTCAATGTTGAAATCACCTCCAGAATCTTGTTGCAGAAGGATTCAACCTGTGATAGATATAAGAATCTCACGGGATAAAGTGGCAACGATACGAGGTGGCAATGATGATATTGCAGCAGCAACAACAAAATGGGACATGCCTGAGTTTAGTATCGACATATGGCAAGAGTTGGCCGAAGATTTCAATATTCATTTTCCCATTCGCTTAGATCATGACTCCTTTTGGGTTATTTTTTCGCTTTCAAGAAGAATCGGCAGGTGTGTCTAA 3135 0.37 MGVTVALTLIEALLILLAIATNKATRFMFPSPHENHPAAADKSCEGDAVSISTVSLHSSHIVADAHPTTKYDVFLSFRGEDTRNNFASYLYEALCKANIQTFMDHKLHKGEDISPVLLRIIEESEISVIIFSTDYASSTWCLDELVHILECKKKFGRVVIPIFYKIDPSNVSKQSGSFGDGFAKLKQRFKDNPNKLQNWIDALSQSTSLSSRWDSKNIRPESKLIKKIVEDILSKLNYCTSSSFHLEGLVGINDKIEKIEELLIHARIVGIWGMGGIGKTTLAKATLHNLKAQFEASSFVGNVREQLARVGLNKLMVECLKELLKDEGLHVYNMKSTFVKRRLQCKKILLILDDVDNLLTAEDLTKLFDWFGEGSRIIVTSRDMQVLKNASASATYHVEKLKFYHALHLFSLKAFKQNEPFKSYLKLSNLVVGYCQGNPLALVVLGCFLYGRTKQEWESALEKLKQAPHKDIFIVLKLSFDGLDEKQKNVFLDLAHLSRETIYNINISLNNIRGFYDFSTYIEISVLKERSLISIDRFGGIDMHDLVREMGEEICRQQLNVDPERPIRLSNHNDVYHFFVNKKGSGTIRCISLDTCKTKEIKLQANAFKKMKGLKSLKFYRSDFKEPSKVYISEALDNLPEELRFFFWEDYPLPSVPLSFCAENLVELEMPHNDLQQLWDADQHFPNLGVMNLIASKHLIELPNLSGAPNLSVIYLDECVNLTQIYSSRSLSKLSILAIRDCTDLRRINIGGNVKEGDSGLVAVYNFLDLINSSFYKLTVKLFISNDGNNVSGFRVKLVRVFFSEILSDQCMNNFESSKSNLLSLLPFVTSPRWSDLIEFGNFKEHFHLHSHHEEITRNNSKEVFNELIAMARKPLEPEEKMITKEVNRDYISYHGKRKPFESEEETMTEMECYCSSTGNRLTRVPNGITRWALLTQVTLQKSDITECEIWNNPGISMLKSPPESCCRRIQPVIDIRISRDKVATIRGGNDDIAAATTKWDMPEFSIDIWQELAEDFNIHFPIRLDHDSFWVIFSLSRRIGRCV 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00829 1044 PRINTS Disease resistance protein signature 268 283 - -
Accr11g00829 1044 PRINTS Disease resistance protein signature 342 356 - -
Accr11g00829 1044 PRINTS Disease resistance protein signature 435 449 - -
Accr11g00829 1044 PRINTS Disease resistance protein signature 729 745 - -
Accr11g00829 1044 Pfam TIR domain 70 251 IPR000157 GO:0007165
Accr11g00829 1044 Gene3D - 401 484 IPR042197 -
Accr11g00829 1044 SUPERFAMILY Toll/Interleukin receptor TIR domain 67 208 IPR035897 -
Accr11g00829 1044 ProSiteProfiles TIR domain profile. 69 236 IPR000157 GO:0007165
Accr11g00829 1044 Pfam Leucine Rich Repeat 664 683 IPR011713 -
Accr11g00829 1044 Gene3D - 68 241 IPR035897 -
Accr11g00829 1044 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 764 IPR044974 GO:0006952
Accr11g00829 1044 Gene3D Ribonuclease Inhibitor 585 755 IPR032675 -
Accr11g00829 1044 Gene3D - 242 396 IPR027417 -
Accr11g00829 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 494 IPR027417 -
Accr11g00829 1044 SUPERFAMILY L domain-like 543 791 - -
Accr11g00829 1044 SMART till_3 70 209 IPR000157 GO:0007165
Accr11g00829 1044 FunFam Disease resistance protein (TIR-NBS-LRR class) 67 238 - -
Accr11g00829 1044 Pfam NB-ARC domain 255 470 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00829 Accr-Chr11 14683793 14688946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00829 71 748 WRKY Transcription Factor Family AT4G12020 29.757 1.69e-69 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00829 - - pcin:129286024 980.319