Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00820 ATGGACGCAACCCTTTCTTTAGTGCTCTTCGAAGCTGTATTGATTTTGCTGGCTATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCACTTGATGATAGTTGTAAAGATGTGGTTCATTCGATTCCCACGGTTTCTTCTCCTCCTCATGTCGTTTCTGCTCCTACTGCAACCAAGTATGACGTCTTTCTTAGTTTTAGAGGGGAAGACACTCGTGACACTTTCGCAAGTTCTCTTTATGAAGCACTTTGCAACGCAAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGACAGGATATTGCGCCAATTCTTCTGAAAACAATAAAGAAATCAGAGATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCAACATGGTGTATGGATGAGCTTGTTCGTATTATGAAATGTAGGAATAAATACGGAAGAATTGTCATCCCTGTTTTCTACCACGTAGATCCCTCAAATATTCGCAAACAGACTGGGAGTTTTGGAGATGGATTTGCTAAGCTTAAGTTTAGATTTAAGCATAGCCAAAGCAGAGTGGAGAAGTGGCAAAATGCTCTGATCCAATCAACAAAACTATCTGGGTGGGATTCAAAGAATATCAGGCCTGAATCTGAACTTATTAAAAAGATTGTGGAAGATATTTTGAGCAAATTGAATACCAAGTCATCATTTGATGTTGAAGGATTAGTTGGGATTGATCATCAGATTCAAAAAATTGAAGAGCTACTAAGTGAAGCTCGCATTGTAGGAATATGGGGCATGGGTGGTATAGGTAAAACCACTCTTGCTACAACTGTATTTCACATGTTGAAAGAACAATTTGAAGCTTTCTCCTTTGTTGGAAATGTGAGAAACCAGCTTGAAAGAATTGGATTAGAAGAATTACAGAAAAAGTGCCTTCAAGAATTATTAAAAGATGAGGGTGTTAACGTTTACAATTTTAAATCCACTTTTGTGAAAAATAGGCTTCGTCGTAAAAAAATTCTTCTAATTCTTGATGATGTCAATAATTCTATAGAAATTGAAGATTTAATCAAAGTATGTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTGCTTAGGAATACTTCTGCATCTACAACATTTCATGTTCCGCAATTGGATTCCCATCAAGCCCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATGAGCCGTCAAAAAGCTATTTGGAGTTGTCAAAGGGGGTAGTGGATTATTGTGGAGGAAATCCATTAGCTCTAAAAGTGTTGGGTTGCTTTCTTCATGGCAGAGGAAAAGAAGAGTGGGAAAGTGCTATGGAAAAATTAAATCAAACTCTTCACAAGGACATTTTTAATGTGTTGAAATTGAGTTTTGATGGACTTGATGACACACAACAGAATGTCTTTCTTGATCTAGCATTTTTCTTGAATGAAGCATGGAGGATTTTTCTAGAAGATTGTGTAGGACACATATATGATCCTTCTGCACGTATTGATATTGGTGTACTTAAAGAGAGATCCCTCATTTCAGTGCATAAAAATGATGATATTGAGATGCATGCTCTTCTAATGGACATGGGGCTTGAAATTTCTAGGCAACACTTAAAATCTAACCCTGAAAAACCCATTCGACTATGGAAGCATGAGGATATTTATAATTTTTTCCACAATGGCAAGGGAATAGAGGATATTCGATGCTTGTCATTGGACTTGAGCAAGATAAGAAGGAGGACTGCATGGAGGACTAGTAATTTTCGAAAGATGCATAATTTAATATTCCTTAAAGTTCACAAGTCTGATAATAGAAAGCCTTCAGAGTTGACTATTTGCGACAATTTGGATTATCTTCCTGAAGAATTGAGGTTTTTAAGTTGGGAAGAATATCCATTTCCACATTGGCCATTACATTTTTGCTGGGAGAATCTTATTATGCTTTCGATGCCTAATAGTAATATGAGACAGCTTTGGAATGGAAATCAACATTTTCCAAATCTAAAGAACATCCTTTTGCCGCATTCAAAACATCTAGATGCACTTCCAGATCTTTCTCATGTCCCTAAGATTGAACGTGTGAATGTTTGGGGTTGTGTGAAATTGGATCAAATCCATTCTTCAGCAGTCCTAAGCAATCTTGTTGGGTTATGGGTAAATCACGATGGGCCAAGGCAAATAAACATTGGGGGAAGTATGAAAGGGACAAGGTCAGGGTTAGTAATGGTCTATAATTATTTGGATCTTGTCAAGAGTTCATGGAATGAAGTGAGAATGAAGGTGTTGGTATGTGGCGACATTATATGCAGTGTTGGATTCAAACATGTGGAAATGCCATTGGCAGAGATAGCAGAATTGAGATATTTACTTCCATTTGTGAGGGAAGTTGGATTGTCAGAGGGTCCAATTGAGTATGGGCATGATTTCGGGCAACATTATGACTATTATTGTTATCATCGGTATCCTCCTAATGTTGTAGTTGGAATGGGGGTGAGGAGGAGGGGTGATAGAGGAGGAGAAAGGCATGTGGTGGAGCCATTGACAAGTGAAATAATTAATGATCATCATCATCAAATATCAATGGAAGCTAGAGAAGGAGGAGAAGAACAAGAAGAGAATGAGGAGTTAATGAGTAGTAATGCTACAATATTTACAAGAATTCCCAATAGCATCAATGGTTGGTCATTGTTGACGAAACTGAGACTAAGGCAGAGTGATTCAATCCTCAAATCACTTTCACTCTCACTCTCTCCTGCTTCTTGCAAACCTCGTGTAGTTGCAACAGTCTCCCTCCACATTCCGCCATCCGCTTTCACTGACCCTCGTGGTTATTATGATTTCTATCTCCAATATGATGGATGGCGTGTGTTCGGCTATCGTGTTAGTAGGTATATGACTTTGGTTACTGACTTCGTTGTCTTGTATTCAGACCCGTAG 2952 0.3784 MDATLSLVLFEAVLILLAIAISKAIRLISPLDDSCKDVVHSIPTVSSPPHVVSAPTATKYDVFLSFRGEDTRDTFASSLYEALCNANIHTFMDHKLHKGQDIAPILLKTIKKSEISLIIFSKDYASSTWCMDELVRIMKCRNKYGRIVIPVFYHVDPSNIRKQTGSFGDGFAKLKFRFKHSQSRVEKWQNALIQSTKLSGWDSKNIRPESELIKKIVEDILSKLNTKSSFDVEGLVGIDHQIQKIEELLSEARIVGIWGMGGIGKTTLATTVFHMLKEQFEAFSFVGNVRNQLERIGLEELQKKCLQELLKDEGVNVYNFKSTFVKNRLRRKKILLILDDVNNSIEIEDLIKVCDWFGEGSRIIITSRDMQVLRNTSASTTFHVPQLDSHQALHLFSLKAFKQNEPSKSYLELSKGVVDYCGGNPLALKVLGCFLHGRGKEEWESAMEKLNQTLHKDIFNVLKLSFDGLDDTQQNVFLDLAFFLNEAWRIFLEDCVGHIYDPSARIDIGVLKERSLISVHKNDDIEMHALLMDMGLEISRQHLKSNPEKPIRLWKHEDIYNFFHNGKGIEDIRCLSLDLSKIRRRTAWRTSNFRKMHNLIFLKVHKSDNRKPSELTICDNLDYLPEELRFLSWEEYPFPHWPLHFCWENLIMLSMPNSNMRQLWNGNQHFPNLKNILLPHSKHLDALPDLSHVPKIERVNVWGCVKLDQIHSSAVLSNLVGLWVNHDGPRQINIGGSMKGTRSGLVMVYNYLDLVKSSWNEVRMKVLVCGDIICSVGFKHVEMPLAEIAELRYLLPFVREVGLSEGPIEYGHDFGQHYDYYCYHRYPPNVVVGMGVRRRGDRGGERHVVEPLTSEIINDHHHQISMEAREGGEEQEENEELMSSNATIFTRIPNSINGWSLLTKLRLRQSDSILKSLSLSLSPASCKPRVVATVSLHIPPSAFTDPRGYYDFYLQYDGWRVFGYRVSRYMTLVTDFVVLYSDP 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00820 983 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Accr11g00820 983 SUPERFAMILY L domain-like 574 910 - -
Accr11g00820 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 480 IPR027417 -
Accr11g00820 983 Pfam TIR domain 59 229 IPR000157 GO:0007165
Accr11g00820 983 Gene3D - 386 470 IPR042197 -
Accr11g00820 983 Gene3D - 226 382 IPR027417 -
Accr11g00820 983 SUPERFAMILY Toll/Interleukin receptor TIR domain 58 201 IPR035897 -
Accr11g00820 983 Gene3D - 55 225 IPR035897 -
Accr11g00820 983 SMART till_3 59 198 IPR000157 GO:0007165
Accr11g00820 983 PRINTS Disease resistance protein signature 254 269 - -
Accr11g00820 983 PRINTS Disease resistance protein signature 328 342 - -
Accr11g00820 983 PRINTS Disease resistance protein signature 668 684 - -
Accr11g00820 983 PRINTS Disease resistance protein signature 421 435 - -
Accr11g00820 983 SUPERFAMILY "Winged helix" DNA-binding domain 457 561 IPR036390 -
Accr11g00820 983 Gene3D Ribonuclease Inhibitor 557 733 IPR032675 -
Accr11g00820 983 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 748 IPR044974 GO:0006952
Accr11g00820 983 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Accr11g00820 983 Pfam NB-ARC domain 242 456 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00820 Accr-Chr11 13753386 13757423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00820 56 704 WRKY Transcription Factor Family AT4G12020 28.936 1.71e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00820 - - pcin:129286024 1000.35