Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00816 ATGCTCAAAGAAGCTTCATTGATCCTATTGGGAGGATTATCAATTCACAAAGCTATTAGATTCATCTCTCATTTGCTAAATAGTAACCAAATTGTTGCTGATGATGATAGTTCTAATGATGATGTGATTTTAAGTCAAACGGGTTCTCCTCATGCTACAAAGTATCATGTGTTCCTTAGCTTTAGAGGGGAAGACACTCGCCAGACTTTTACAAGTCATCTTTATAAAGAACTTCGTAAGATAGGCATCCAGACTTTTATGGATGATGAACTCCGCAAAGGGGAAGAAATATCACCAGTTCTTTTGAGAACAATAGAGGAATCAGAAATATCAGTGATAATTTTCTCTAAGGATTATGCTTCTTCAACATGGTGTATGGATGAACTTGTTCACATAATGGATTGCAAGAAAAAATTTGGAAGGGTTGTGATACCTATTTTCTACAATGTGGATCCTTCAAACATACGCAAACAAAAGGGGAGTTTTGGAAATGGATTTGATGTATTGAAGCGAAGATTTAAAGACAATCAAGAAAAATTGAAAAAATGGAGAAATGCTTTAAATCAATCTACAAGTCTCTCTGGATGGGATTCCAATAATACTATACCTGAATCCAAATTTGTTGAGGAGATTGCCAAAGACATTTTGAGCAAGTTGGATTATAAGTCATCATCTCACCTTGAAAGATTGGTTGGCATTTCTGGTCATATTGGAAACATTGAAAAACTTCTGACTGAGGCTCGAATTGTGGGAATATGGGGTATGGGTGGTTCTGGTAAGACCACACTTGCTAAAGCTCTCTTTCAAGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTGTTGAAAATGTCAAAGAGCAATTATCAAGAATTAGTTCGGATGAGTTAAAGAGAAATTGTCTCAAAGAATTATTAAAAGATGGGGACATCAACATCTATGATATAAAATCCAATTCTGTGAAAAGTAGGCTTCAACACAAAAAAGTTCTCCTTATACTTGATGATGTGGACAATTTAGTAATAGGTGAAGATTTAGCCAAAGTGTGTGATTGGTTTGGCGAAGGAAGTAGGATTATTATAACATCAAGAAACCAGCAAGTGCTAAAGAATGCTTCTGCATTTTCAACCTATCATGTTTCAAATTTGGATTTGGATGATGCCTTTTATCTCTTTAGTTTGAAAGCGTTCAAGCAACATGAGCCATCTGAAGGTTACATGGAGATATCAAAATCAGTAGTGAAATATTGTCAGGGAAATCCATTAGCCTTGGTAGTGTTGGGTTGCTTTCTCTATGGCAGAGGAAAAGAAGAGTGGGAAAGTGCTTTGGAGAAACTAAATGAAGCTCCACCCAAAGAAGTTGTTGATGTTTTGAAGTTAAGTTTTGATGGACTTGATGACAAACAGCAGAATGTATTTCTTGACATGGCATTCTTAATCAAGGAAGGAGTTTGTATTTCTGTGGACTTGATAAGACAAATATATGGCTCTTTTGTGGATATTGAAATTAGTGTTCTGAGAGAGAAATCCCTTATTTCATTTAACAATCATACTGATGGTATTGGGATGCACAATCTTGTAATGAAAATGGGCCTTGAAATTACTAGACGACAGTTATTCTCTAATTCTGAAACTCCTATTCGACTATGGAGGGATGAGGACATTTCTAAATTTTACATCGGTGACAAGGAAATAGAGGCAATTCGATGCTTGTCATTGGACTTGAGCAAAATAAGGAGGATTGCATGGAAGGCTAGTAATTTTCAGAGGATGCATAATTTAATATTCCTTAAAGTTTACAAGTCTGACGACAGAATTCCTTCAAAGCTAACTATTTATGACAATTTGGATTATCTTCCTGAAGAGTTGAGGTTCTTTATCTGGGAAGAATATCCATTTTCACATGTGCCATTACATTTTTGCTCCGAGAATCTTATTACGCTTCGGATGCCTAATAGTAATATCCGACATCTTTGGAACGAAAATCAGCATTTTCCAAATCTAGGGTGCATCGTTCTGCGGGGTTCAAAACATCTAACTACACTCCCAGATCTCTCTCATGCCCCTAGGATTTATATGGTGGAAGTTAGTGGTTGTGTGAAATTGGATCAAATCCATTCTTCAACTGTCCTAGGCAATCTTGTCTGTTTATATGTAGCAAACGATGGGCCAAGGCGAATAAACATTGGGGGAACTATTAAAGGGACAAGGTCAGGGGTAGTAGTGGTGTACAATTATTTGGATTTTCTCAAGTTGTCATTGATTAAAGTGAGAGTGAAAGTGTTGGTATGTGGCGACATCATATGCGGTCTTGGATTCAAATATGTGGAAATGCCATTGGCAGAGAAAACAGAATTGAGTTATCTACTTCCATTTGTGAGGGGAGTTGACTTTGTAGAGGATCCAATTGAGTATGGGCATGATTTCTGTGAACTTTATGACTGTAACTATAATTGTGATTATTATATTGGATTTGACATGAGGGTTAGGAGGAGGGATGATAGAGGAGGAGAAAGGCATGTGGTGGGGCCATTTACAAAAGAAATGATTAATGATCGTCAAACATCAATGGAAGCTAGAGGAGGAGGGGGAGGGGGAGGAGGAGAGTTAGAAGAAGGGGAGGAGGAGTTAATAAGGGAATATTATTGTGGTGGTAATAACAGTAGTAGTAATGCTACAATATTCATAAGAGTTCCCAGCAGCATTACTCGGTGGTCATTGTTGACGGAATTGAGATTAAGAAAGAGTGATATGGTTGAAGATTCAATCCTCAAATCACTTTCACTTTCATTCTCCTATGCTTCTTGCGAACCTCTCTTAGATCTAACACTCGCCCTCCACATTCCGCCATCCGCTTGGACTGACCATGATGATCATTATTTCATGCTCTTACATGATGATGGTCATCATGCTGGTGGGTTGAGCTATTTTCTTGATCCTGATTATACCTTTGGTGTTCGGTATCTACACTTATAA 2973 0.3744 MLKEASLILLGGLSIHKAIRFISHLLNSNQIVADDDSSNDDVILSQTGSPHATKYHVFLSFRGEDTRQTFTSHLYKELRKIGIQTFMDDELRKGEEISPVLLRTIEESEISVIIFSKDYASSTWCMDELVHIMDCKKKFGRVVIPIFYNVDPSNIRKQKGSFGNGFDVLKRRFKDNQEKLKKWRNALNQSTSLSGWDSNNTIPESKFVEEIAKDILSKLDYKSSSHLERLVGISGHIGNIEKLLTEARIVGIWGMGGSGKTTLAKALFQELKAQFDAFSFVENVKEQLSRISSDELKRNCLKELLKDGDINIYDIKSNSVKSRLQHKKVLLILDDVDNLVIGEDLAKVCDWFGEGSRIIITSRNQQVLKNASAFSTYHVSNLDLDDAFYLFSLKAFKQHEPSEGYMEISKSVVKYCQGNPLALVVLGCFLYGRGKEEWESALEKLNEAPPKEVVDVLKLSFDGLDDKQQNVFLDMAFLIKEGVCISVDLIRQIYGSFVDIEISVLREKSLISFNNHTDGIGMHNLVMKMGLEITRRQLFSNSETPIRLWRDEDISKFYIGDKEIEAIRCLSLDLSKIRRIAWKASNFQRMHNLIFLKVYKSDDRIPSKLTIYDNLDYLPEELRFFIWEEYPFSHVPLHFCSENLITLRMPNSNIRHLWNENQHFPNLGCIVLRGSKHLTTLPDLSHAPRIYMVEVSGCVKLDQIHSSTVLGNLVCLYVANDGPRRINIGGTIKGTRSGVVVVYNYLDFLKLSLIKVRVKVLVCGDIICGLGFKYVEMPLAEKTELSYLLPFVRGVDFVEDPIEYGHDFCELYDCNYNCDYYIGFDMRVRRRDDRGGERHVVGPFTKEMINDRQTSMEARGGGGGGGGELEEGEEELIREYYCGGNNSSSNATIFIRVPSSITRWSLLTELRLRKSDMVEDSILKSLSLSFSYASCEPLLDLTLALHIPPSAWTDHDDHYFMLLHDDGHHAGGLSYFLDPDYTFGVRYLHL 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00816 990 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 196 IPR035897 -
Accr11g00816 990 Pfam TIR domain 54 229 IPR000157 GO:0007165
Accr11g00816 990 Gene3D - 381 465 IPR042197 -
Accr11g00816 990 SMART till_3 54 193 IPR000157 GO:0007165
Accr11g00816 990 SUPERFAMILY L domain-like 567 914 - -
Accr11g00816 990 Gene3D - 52 216 IPR035897 -
Accr11g00816 990 ProSiteProfiles TIR domain profile. 53 219 IPR000157 GO:0007165
Accr11g00816 990 SUPERFAMILY "Winged helix" DNA-binding domain 452 555 IPR036390 -
Accr11g00816 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 474 IPR027417 -
Accr11g00816 990 FunFam Disease resistance protein (TIR-NBS-LRR class) 51 221 - -
Accr11g00816 990 Gene3D Ribonuclease Inhibitor 551 725 IPR032675 -
Accr11g00816 990 Pfam NB-ARC domain 242 450 IPR002182 GO:0043531
Accr11g00816 990 Gene3D - 217 376 IPR027417 -
Accr11g00816 990 PRINTS Disease resistance protein signature 416 430 - -
Accr11g00816 990 PRINTS Disease resistance protein signature 323 337 - -
Accr11g00816 990 PRINTS Disease resistance protein signature 249 264 - -
Accr11g00816 990 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 55 921 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00816 Accr-Chr11 13537802 13541887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00816 55 698 WRKY Transcription Factor Family AT4G12020 27.921 3.54e-65 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00816 - - pcin:129286024 945.266