Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00790 ATGTCATTTTCTTGTGCAAAGAACTTCTTTCAGAGGTTCTGGTTAGATGAAATCAATATGGGAAGTTATTCTCATAGCAACTTTCTTTGTAATGATCTTCTTCCATCTCTTGGATCCCAAATGGTGCAGGAAATCAAGCTCCCAAGATTCACAATCTCTCCTTTCGATCCGAGATACAGGGCTTGGGAGATGATACTGGTAGTTCTAGTCATTTACTCAGCCTGGATATGTCCCTTTGAGTTTGCCTTTCTGTCTACAAAGAAAGATGCACTGTTCGTCATAGACAATGTTGTTGACGGCTTCTTTGCCGTTGACATCATGCTCACATTCTTTGTTGCATATTTAGATAGTCAGTCTCACCTCCTTGTTGATGATCATTGGAAAATTGCATTCAGGTACATATCTACCTGGTTTATTTTTGATGTCTGCTCAACAGCACCATTTCAGAGCATCAGCCTTCTCTTTACAAACCATAGCAGTGAGCTTGGCTTTGACCTGCTTAACATGCTTCGCTTATGGCGCTTAAGACGGGTCAGCTCTCTGTTTGCAAGACTTGAGAAAGACATCCGCTTTAACTATTTCTGGACCAGGTGCATAAAACTCACTGCTGTAACATTGTTTGCTGTCCACTGTGCCGGATGCGCTTGCTATTTAATTGCAGAAAAGTATCCTGATTCCAAAAGGACATGGATTGGTGCAACGCACCCAAACTTCAAAGAAGAAGGTCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTAACACTTACCACTACTGGCTATGGGGATTTACATGCTCAAAATCCTGGGGAGATGCTGTTTGATACTGTGTTCATGCTGTTCAATTTAGGATTAACATCATATATCATTGGAAATATGACAAACCTTGTTGTTCACTGGACCAGCCACACCAAAACTTTTAGAGATACGATAAGAGCAGCATCAGAGTTTGCATCAAGGAATCATCTGCCGCATCACCTACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAACAAGAAACGTTAAATCGTCTGCCTAAGGCAATTCGTTCAAGCATCGCAAATCATCTCTTCTTTCCTATAGTGAAGGAGGTCTACCTATTCCATGGAGTTTCCCATGACTTCCTTTTCCAACTGGCGTCAGAAATGGAAGCTGAGTATTTTCCACCCAAGGAAGATGTGATCCTGCAAAATGAGGTTCCTACAGATCTTTACGTGCTACTTTCAGGAGCAGTGGATCTTGTTCGCCACATGGATGGGTATGACCAAGTTGTGGGGAAGGCAGTTTTGGGAGAAACATTTGGAGAGATTGGGATATTTACCCACAGACCACAACCATTCACTACCCGCACTGCAGAGCTTTCTCAAATCTTACGGCTCAACAAAGTTTCATTAATGAAGTCTGTTCGAGCGCATCCACAAGATTCAAATATCATAATGGATAACCTTGCCAGGAGATTGAAGGGACAAGACGGCTTGGGCTTTGAGTATCCAAATGCAGAACCTGGATTGGTCCTACATGAAAAATTAGATGAAGTAAGAGCAAGAGAGAGCCTTTCTCATGCATGCACAAACAGTTCATATGAGGATCCATTAGTCCAAGAAGGACGGTACAGAAACTTCACAGACTCAGAGATCACATTGCATGAGGTGACAAATGAATATGGAAAAAGGGATATTCATGCTGCTACATTCAAAGGGCAACCAGATATGGTTGACATACTGCTCGAAAGAGATGCAAATGCAAAGCACCCGAATTTCGTACGTTGGAAATCCAAAAATCAGTTAGAAGAACAGCAAGGTCACAAGAACACTTCTAACCACTTCATAAATTGTGGAGATAGGGAGAGATCAGATGATTATGGAATAGACTTTGAGGAGCCAGATATATTGAACCATGTTAGGAATCACACAACCAGAAACAGAAAACATGGTGATCCCAAATCATTTAACCACCCTTTAGAGAATGTATATAAAAATTCTTATTTGAGTAATCCTAACTGTCCAAGCAATAGAGAAGTGGCTAGATTCAACAAGAAGAGAGTCACGATTCACTTGATTGGCCAAAGCAGCAGTACTTCACGAGGACAGCACGGGAAGTTGATTATTCTACCTGATTCAATAGAAGAGCTGCTGAAGATTGCTGAAGAAAAGTTTGCAGGATCAAAACCTACAAGAGTTATTAATCCAGAGAAAGCAGAGATAGATGACATAAGCGTTGTTCGAGATGGCGATCACCTCTTTTTCCATTGCAGCAATAGTGAAAATTTGAAGTCATTACGTTACCTATCGTAG 2325 0.4116 MSFSCAKNFFQRFWLDEINMGSYSHSNFLCNDLLPSLGSQMVQEIKLPRFTISPFDPRYRAWEMILVVLVIYSAWICPFEFAFLSTKKDALFVIDNVVDGFFAVDIMLTFFVAYLDSQSHLLVDDHWKIAFRYISTWFIFDVCSTAPFQSISLLFTNHSSELGFDLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLTAVTLFAVHCAGCACYLIAEKYPDSKRTWIGATHPNFKEEGLWDRYVTAIYWSIVTLTTTGYGDLHAQNPGEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSHTKTFRDTIRAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNRLPKAIRSSIANHLFFPIVKEVYLFHGVSHDFLFQLASEMEAEYFPPKEDVILQNEVPTDLYVLLSGAVDLVRHMDGYDQVVGKAVLGETFGEIGIFTHRPQPFTTRTAELSQILRLNKVSLMKSVRAHPQDSNIIMDNLARRLKGQDGLGFEYPNAEPGLVLHEKLDEVRARESLSHACTNSSYEDPLVQEGRYRNFTDSEITLHEVTNEYGKRDIHAATFKGQPDMVDILLERDANAKHPNFVRWKSKNQLEEQQGHKNTSNHFINCGDRERSDDYGIDFEEPDILNHVRNHTTRNRKHGDPKSFNHPLENVYKNSYLSNPNCPSNREVARFNKKRVTIHLIGQSSSTSRGQHGKLIILPDSIEELLKIAEEKFAGSKPTRVINPEKAEIDDISVVRDGDHLFFHCSNSENLKSLRYLS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00790 774 FunFam Potassium channel KAT3 61 301 - -
Accr11g00790 774 Pfam KHA, dimerisation domain of potassium ion channel 690 759 IPR021789 -
Accr11g00790 774 SMART cnmp_10 377 494 IPR000595 -
Accr11g00790 774 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Accr11g00790 774 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr11g00790 774 PANTHER POTASSIUM CHANNEL AKT1 26 502 IPR045319 GO:0005249|GO:0006813
Accr11g00790 774 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr11g00790 774 Gene3D - 60 300 - -
Accr11g00790 774 CDD CAP_ED 377 490 IPR000595 -
Accr11g00790 774 Pfam Cyclic nucleotide-binding domain 397 478 IPR000595 -
Accr11g00790 774 FunFam Potassium channel KAT2 365 501 - -
Accr11g00790 774 Gene3D Helix hairpin bin 301 367 - -
Accr11g00790 774 ProSiteProfiles Ankyrin repeat profile. 565 597 IPR002110 GO:0005515
Accr11g00790 774 ProSiteProfiles KHA domain profile. 691 774 IPR021789 -
Accr11g00790 774 Gene3D Jelly Rolls 369 501 IPR014710 -
Accr11g00790 774 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00790 Accr-Chr11 13121533 13126654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00790 614 759 Ion Channels AT5G46240 33.721 4.37e-18 87.0