Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00785 ATGAAGCGAAGATTTGAAGACAATCCAGAAAAATCACAAAAGTGGATAAATGCTTTACACAAAGCTGCAAATCTCTTTGGATTTGATTCCAAGAATATCAGACCTGAATTCAAACTTGTTGAAGAGATTGTCAAAGACGCTTTGAACAAGTTGAACTATAATTCATCATATCATCTTGAAGGACTTGTTGGCATTGCTCGTCATATCAAGAATATTGAAAACCTTTTAAAAGAGGCTTGCATTGTCGGAATATGGGGTATGGGTGGTGCTGGTAAGACCACTCTTGCTAAAGCTCTATTTCAGGAGTTGAGAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGAAACTAAAAGATATTGGTTTGGACAAGTTACAACAAAATTGCCTCAAAGAATTTTTAAAAGATAAGGAGATTAGCATCTATGACATAAACTCAGCATCTGTGAAAAAAGACTCGGACGCAAGAAAATTCTCCTTCTACTTGATGATGTAG 504 0.3532 MKRRFEDNPEKSQKWINALHKAANLFGFDSKNIRPEFKLVEEIVKDALNKLNYNSSYHLEGLVGIARHIKNIENLLKEACIVGIWGMGGAGKTTLAKALFQELRAQFDAFSFIENVKEKLKDIGLDKLQQNCLKEFLKDKEISIYDINSASVKKDSDARKFSFYLMM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00785 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 141 IPR044974 GO:0006952
Accr11g00785 167 Gene3D - 48 162 IPR027417 -
Accr11g00785 167 Pfam NB-ARC domain 78 114 IPR002182 GO:0043531
Accr11g00785 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 144 IPR027417 -
Accr11g00785 167 Gene3D - 1 47 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00785 Accr-Chr11 12881404 12882049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00785 5 153 WRKY Transcription Factor Family AT4G12020 28.481 1.08e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00785 - - pcin:129286024 190.66