Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00772 ATGTCAATATATGATTTAGTTCCCGGCAACATTGTTCATCTAGCTATTGGAGATCAAGTCCCGGCCGATGGACTCTTTGTTTCAGGATTCTCTGTTTTGATCGATGACTCAAGTTTAATCGGAGAGAGCGAACCAGTGATGGTGAATTCTCAGAACCCATTTATTCTTTCAGGAACAAAAGTTCAAGATGGACCATGTAAAAGTGCGGGTCACAACCGTAGGGATGACTGGATGAGAACTCAATGGGGAAAATTAAAATTAATGGCTACGTTAAGTGAAGATGAAGATGATGAAACGCCGTTACAGGTGAAACTAAACGGATTCGCCAGTATCATAGCGAAGATAGGTTTGTGA 354 0.4124 MSIYDLVPGNIVHLAIGDQVPADGLFVSGFSVLIDDSSLIGESEPVMVNSQNPFILSGTKVQDGPCKSAGHNRRDDWMRTQWGKLKLMATLSEDEDDETPLQVKLNGFASIIAKIGL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00772 117 PANTHER CATION TRANSPORTING ATPASE 1 117 - -
Accr11g00772 117 Pfam E1-E2 ATPase 3 116 - -
Accr11g00772 117 SUPERFAMILY Calcium ATPase, transduction domain A 2 67 IPR008250 -
Accr11g00772 117 Gene3D - 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00772 Accr-Chr11 12491098 12491451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00772 1 117 Primary Pumps ATPases AT2G22950 74.380 8.25e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00772 K01537 - gmx:547567 172.94