Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00742 ATGGACTCAAAAACTAGTGCTAGAGCTCCCCAGAAACAGCATCATAAGACGGCTGGGATTCAAACATTAGAGGCAAAAGACATCAAATCTTCAAAGACAAGCAAATCTGAACTGGCTGCGCCAGAAGATTTATCAAAATATGTCCAGAACACAACAAAGCATTACGCTGGAGACACTTCTGAAAACAAGAAGCTAGGAATTTCAAACCCAAAGGAGTCAGCTGATTCCTTGATCAGTAAATTTGGTTCTTCGGTTTCCTTATCTGTTAATGAACAACTATCTGGAGCTGTCAATCATGTTGTTAATGGAAATAGAGGTTTGCAGGACAGCTCTATTGACCAAGAAAAGAAAACATCAGAATATGGAAGTGTGAAGAGTAGTTCTGTTTCTGCTAAAGTTAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGGAGCGCCAAGATTAGTGATCGAGCTGATCTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACCTGAGATGGGAAGCTATTCAAGCCGTCCGAGCTAAAGATGGGGTTATGGGCTTAGGTCACTTTAGACTGTTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTATCAGAGTTGAGTGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCCTTAGCCAGCCGTAAGAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCGTCATTGTATACCCATTTTGAGACGGAGAAGTTCTCATGCTTGGTGATGGAATTCTGCCCAGGTGGAGACCTGCACACCCTCAGGCAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTACTGCTGGCGTTGGAGTACCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGATGATGGACACATTATGCTTTCAGACTTTGATCTTTCCCTCCGTTGTGCTGTTAGTCCAACTCTTGTCAAAGGTTCAGTCATGGAATCTGATCCTTTGAGAAAGAATCCTGTATATTGTGTACAGCCTGCTTGTATTGAGCCGCCTTCCTGCATCCAGCCATCTTGTGTTGCTCCCACAACATGCTTTTCGCCTCGGCTCTTTTCTAGCAAGTCAAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCTGAGCCTACCGATGCACGATCTATGTCATTCGTGGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGCAGTGCAGTTGATTGGTGGACTTTTGGAATATTTCTATATGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGATCAGGGAACCGAGCTACGTTGTTTAACGTTGTGGGCCAACCTCTCCGATTTCCTGAAGCACCTGTTGTAAGTTTTGCAGCAAGGGACCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGAACAGGTTGGCTTATAAACGAGGAGCCACAGAGATAAAGCAACATCCCTTTTTCGAAGGTGTGAATTGGGCACTTGTTCGCTGCGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCATCAGCTGGTGAAAAGGCCGGCCACCACATGTCAATTCCCGATCAGAAAGGTTCCGGTAATTATCTTGAGTTTGATTTCTTCTAG 1830 0.4563 MDSKTSARAPQKQHHKTAGIQTLEAKDIKSSKTSKSELAAPEDLSKYVQNTTKHYAGDTSENKKLGISNPKESADSLISKFGSSVSLSVNEQLSGAVNHVVNGNRGLQDSSIDQEKKTSEYGSVKSSSVSAKVSDGASSLAKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVMGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPSLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKGSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQNRLAYKRGATEIKQHPFFEGVNWALVRCATPPEIPKPVEYEKIPSPASSAGEKAGHHMSIPDQKGSGNYLEFDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00742 609 CDD STKc_phototropin_like 213 571 - -
Accr11g00742 609 MobiDBLite consensus disorder prediction 1 73 - -
Accr11g00742 609 SUPERFAMILY Protein kinase-like (PK-like) 190 578 IPR011009 -
Accr11g00742 609 FunFam serine/threonine-protein kinase D6PK-like 298 365 - -
Accr11g00742 609 PANTHER FLIPPASE KINASE 1-RELATED 32 576 - -
Accr11g00742 609 MobiDBLite consensus disorder prediction 45 73 - -
Accr11g00742 609 Pfam Protein kinase domain 215 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00742 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00742 609 MobiDBLite consensus disorder prediction 101 128 - -
Accr11g00742 609 FunFam Serine/threonine-protein kinase AGC1-7 445 570 - -
Accr11g00742 609 MobiDBLite consensus disorder prediction 161 184 - -
Accr11g00742 609 SMART serkin_6 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00742 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
Accr11g00742 609 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
Accr11g00742 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Accr11g00742 609 Gene3D Transferase(Phosphotransferase) domain 1 298 365 - -
Accr11g00742 609 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
Accr11g00742 609 ProSiteProfiles Protein kinase domain profile. 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00742 Accr-Chr11 11756334 11780357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00742 34 609 AGC Kinase Gene Family AT5G47750 77.163 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr11g00742 Pkinase 4.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00742 K08286 - gmx:100781600 1008.44