Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00726 ATGGCGGCGTCAAGGGGTCAGCGAAACTCAGCTGGTAGAGTAAGTGGCGGAAGCAGAGAGAAAACCTTGCCGCTTACGGCCGTCGGAAAAATCATGAAGAATGTGTTACCGGCGGGGGCGAGGATCTCTAAAGAAGCGAAAGAAAGTGTCCAAGAATGCTCGTCGAAGTTCGCCGCTGTCATCTTGAATAGAGCCATCCAGGAGTGCGAGGACGAGGAAAGCCCTGAGGTCAACGGCGGCCACATCATTTTGGCGTTGACCTATTACGGATTGGGTGATTACGTCTATCAACTCATGAATGACCTGTACCAGTTTTGGAACATTGATGAGCCGGAACCGGAGCCGGAGCCGGAGCCGGTGCAGGAGAGGAGTACTAGACCTACTCTGGAATGTCGTCTCCACCGATTCCGCGACGGCGGTGACTATCCGAAAGGGATTCTTGCGGTTAGGACCGCTGAGAGTGTTCAACATGTGTCCGCTCTCATTTTGCGCAGGATGATTTATTGA 507 0.5306 MAASRGQRNSAGRVSGGSREKTLPLTAVGKIMKNVLPAGARISKEAKESVQECSSKFAAVILNRAIQECEDEESPEVNGGHIILALTYYGLGDYVYQLMNDLYQFWNIDEPEPEPEPEPVQERSTRPTLECRLHRFRDGGDYPKGILAVRTAESVQHVSALILRRMIY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00726 168 Gene3D Histone, subunit A 12 126 IPR009072 GO:0046982
Accr11g00726 168 SUPERFAMILY Histone-fold 20 105 IPR009072 GO:0046982
Accr11g00726 168 MobiDBLite consensus disorder prediction 1 22 - -
Accr11g00726 168 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 22 86 IPR003958 -
Accr11g00726 168 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 17 105 IPR027113 GO:0001228|GO:0006355|GO:0016602
Accr11g00726 168 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00726 Accr-Chr11 11439492 11439998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00726 19 105 CCAAT-HAP3 Transcription Factor Family AT2G47810 42.529 5.63e-21 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr11g00726 CBFD_NFYB_HMF 2.2e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00726 K08065 - zof:122040301 87.0409