Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00701 ATGGGTGATCATCATGAGATTCAACAAAAACCAGAACAAGAACCCTTGCTTAGAATTCATACTTCTTATCTCAATGAGAAGATGAATGATCTCCAGAGAAGGAGGCGTCTCAACCGCCATGGCAAAGGTTCATCTTCTGGCAATAATAATATCAACAATGAAGAAGAAGAAGAAAATACGATTCATCAAAATCCTCCACCTTTATCAAACTTAGATCCTGAACAATTCAAATCCATGAAACTAGTCCTATGCCTAACTGCATACCTAGGGTTCGGAACCCTAATCTTCTTCCTCATAAGGCATCAAATAAAGGGCATAGAGACCAATGGCTTCCTTGATGCCCTTTATTTCTGTGTTGTTACTATGACGACGGTTGGTTATGGTGACCTTGTTCCAAACAGCAAATTGGCCAAACTTTTTGCATGTGTATATGTCTTCACAGGCATGGCTCTTGTAGGGATAATCATGAGCAAAGCAGCAGATTACTTCCTTGAGAAGCAGGAAATCCTCTTCGCTCGGGCCATCCACGTGGGCGAAAACGTGAGTCTTTCGGAGCTTCTCGAGGAGGTCGAGGCACATAAAGTGAAGTACAAGTTCTTTACAGCATCAGCTGTTCTTGTAGTGCTCATGATTGTAGGAACTGTTTTTCTTTGTTTGGTTGAGAATCTTGAGATTGTGGATGCCTTTTATTGTGTTTGTTCTACTGTTACTACTTTAGGGTATGGTGATAAGAGCTTCTCCACAAGTATTGGACGTGGTTTTGCTGTGTTTTGGATATTGAGTAGCACTGTTTGTTTGGCTCAGTTTTTCTACTATCTTGCTGAGCTTTATACTGAAGGTAGACAAAAATCTCTGGTCAGAACTGTTCTTTCCAGAAAACTAGTACGCTCGGATCTTGAGGCTGCAGATCTTGATCATGACAATGTTGTTAGCGCTGGAGAGTTCATTGTATACAAGTTGAAGGAAATGGGAAGGATCAGCCAACAAGATATTTCTATTGTGATGGAGGCTTTTAGGAAACTTGACTTTGATAAATCAGGAACTTTGACTGAAGCTGATCTCTAA 1065 0.4066 MGDHHEIQQKPEQEPLLRIHTSYLNEKMNDLQRRRRLNRHGKGSSSGNNNINNEEEEENTIHQNPPPLSNLDPEQFKSMKLVLCLTAYLGFGTLIFFLIRHQIKGIETNGFLDALYFCVVTMTTVGYGDLVPNSKLAKLFACVYVFTGMALVGIIMSKAADYFLEKQEILFARAIHVGENVSLSELLEEVEAHKVKYKFFTASAVLVVLMIVGTVFLCLVENLEIVDAFYCVCSTVTTLGYGDKSFSTSIGRGFAVFWILSSTVCLAQFFYYLAELYTEGRQKSLVRTVLSRKLVRSDLEAADLDHDNVVSAGEFIVYKLKEMGRISQQDISIVMEAFRKLDFDKSGTLTEADL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00701 354 SUPERFAMILY Voltage-gated potassium channels 194 292 - -
Accr11g00701 354 Pfam Ion channel 84 163 IPR013099 -
Accr11g00701 354 Pfam Ion channel 205 277 IPR013099 -
Accr11g00701 354 SUPERFAMILY Voltage-gated potassium channels 75 165 - -
Accr11g00701 354 SUPERFAMILY EF-hand 291 354 IPR011992 -
Accr11g00701 354 Gene3D - 74 169 - -
Accr11g00701 354 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 78 332 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr11g00701 354 ProSiteProfiles EF-hand calcium-binding domain profile. 329 354 IPR002048 GO:0005509
Accr11g00701 354 ProSitePatterns EF-hand calcium-binding domain. 342 354 IPR018247 -
Accr11g00701 354 PRINTS Two pore domain K+ channel signature 120 148 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr11g00701 354 PRINTS Two pore domain K+ channel signature 237 246 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr11g00701 354 MobiDBLite consensus disorder prediction 34 69 - -
Accr11g00701 354 Gene3D - 179 273 - -
Accr11g00701 354 Gene3D - 274 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00701 Accr-Chr11 10696886 10698983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00701 65 354 Ion Channels AT5G55630 56.229 1.77e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00701 K05389 - qsa:O6P43_031367 408.297