Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00688 ATGGAAACTGATTCTTCTGATAAAGGTGCTGACCAATTTATTGAGGTTGATCCAAGTAGAAGATATGGAAGATACTCCCAGTTACTAGGAATAGGCTCTGTAAAGAAAGTGTACAGAGCTTTTGATCAACTAGAAGGCAAAGAGGTGGCTTGGAACCAAGTCTCTCTACAAAAATTCGCCAGCAACGAGGACGTGATCAAGCGTCTCTACTTCGAGATTAAGTTATTGAAAGAGTTAAAGAACGAACACATCATAAAACTTTACCATTCATGGACAGACAAAGAGAAGAGGACTCTGAACTTCATCACTGAGGCCTGCGTTTCGGGAAGCCTGAGAGATTACAGAAAAAAACACTGCCACCTATCCATTATCGCCGTTAAGAAATGGTGCAGGCAAATCTTGAAGGGTTTAGAGTATCTTCATCTTCATCATCCTTGTATCATTCACGGAGACCTTAATTGCAGTAACATTTTCATCAATGGAAATGTGGGGCAGATCAAGATTGGAGATTTAGGGGTGGCGACGATGTTGGGAGAGAGTCATAGGGCACATACCATGATTGGGACACCAGAGTTTATGGCACCAGAGTTGTATGAAGAGAACTATACAGAGAATGTTGATATATATTCGTTTGGTATGTGTTTGTTGGAGATGGTTACGATTGAGATTCCTTACAGTGAATGTGATAGTATTGCAAAAATCTATCAGAAGGTGACCTCTGGAATAAGACCTGAGGCCGTGGAAAAGGCGAGAGGCCCCAAGGTTAAGGACTTTATTGAGAAGTGTCTTGCTTCTAACAGGCCTTCTGCATCAGAGCTTCTTCAGGATCCCTTCTTTGATGGGATTGATGATGAGATTGAATATGGCAATGTTGGTTTGGAGTTATCTATGCTACATTTGTAG 903 0.4142 METDSSDKGADQFIEVDPSRRYGRYSQLLGIGSVKKVYRAFDQLEGKEVAWNQVSLQKFASNEDVIKRLYFEIKLLKELKNEHIIKLYHSWTDKEKRTLNFITEACVSGSLRDYRKKHCHLSIIAVKKWCRQILKGLEYLHLHHPCIIHGDLNCSNIFINGNVGQIKIGDLGVATMLGESHRAHTMIGTPEFMAPELYEENYTENVDIYSFGMCLLEMVTIEIPYSECDSIAKIYQKVTSGIRPEAVEKARGPKVKDFIEKCLASNRPSASELLQDPFFDGIDDEIEYGNVGLELSMLHL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00688 300 Gene3D Transferase(Phosphotransferase) domain 1 107 283 - -
Accr11g00688 300 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00688 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 280 - -
Accr11g00688 300 FunFam Probable serine/threonine-protein kinase WNK1 7 104 - -
Accr11g00688 300 Gene3D Phosphorylase Kinase; domain 1 8 104 - -
Accr11g00688 300 Pfam Protein kinase domain 26 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00688 300 FunFam probable serine/threonine-protein kinase WNK9 106 285 - -
Accr11g00688 300 SUPERFAMILY Protein kinase-like (PK-like) 16 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00688 Accr-Chr11 10505232 10506134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00688 7 282 MAP Kinase Kinase Kinase AT5G55560 66.187 2.45e-143 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr11g00688 Pkinase 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00688 K08867 - twl:119985907 426.017