Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00639 ATGGGGAAATCCGGGGGGAGAAAAAAGAAGGGTGGTTCGAATCAAGTTGTTGCTGATAATTCAGCTCCAAGTGCTAATGGTGGTGTGGATGTAGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGCTTAAGGAAGAAGGGAATAAGAGGTTCCAAAACAAGGATTATGCTGGTGCTCTTGAGCAATATGAGAATGCTCTTCGACTAACCCCTAAGAACCACCCTGAGAGAGCGGTCTTTCACAGCAACAGAGCTGCATGCTTGATGCAAATGAAGCCCATAGATTATGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCAGTATGTGCGGGCACTTCTTCGGAGGGCTCGGTCATTTGAGGCTATTGGGAAGTATGAAATGGCTATGCAGGATGTTCAAGGCTTACTGGTAGCCGACCCTAATCAGCGGGATGCTCTGGAGATTGCCCAAAGACTGAGGACAGCACTTGGTCCTCGCCAGGAAGCCCAGCAGGATCTTCAGAGTCGGCCCTCCCCTGCTGCTCTTGGTGCCTCTGCAGTCCGTGGTGCCCCTATTGCTGGTCTAGGGCCATGTTTACCAGCCAGGCCAGTATCGAAGAAAGGTGCAAATTCAGCTGGTGGATTAGTTGCTCCTGCTAACAGTAAGCCAGAGAAGTCTCAACCAACTTCAATTACTGAAAATGGTCCAGAGACCAAGTCACAAATGCCAAAAGTTGCGTTGAAGCCTTCAAATGTTTCAGCAAGATCAATGAACGCAAGAAAAGAAAACCACAACGAACTGTCATCACATTCGTCAGTTATACATGGACAGCATTTAGACTTTGCAATTCGGTGGAGGCCATTGAAACTTGTTTATGATCATGACATCAGGCTTGCCCAAATGCCAGTGAATTGCAATTTTAGAACTCTAAGGGATGTGGTGAGTAAAAGATTTCCTTCATCAAAGTCAGTTCTGATCAAGTATAAGGATAGCGATGGTGATTTGGTGACAATAACTTCTACTGATGAACTTAGACTGGCAGAATCTGGTGCTGATAGCCATCTTATAAAAGAGCCTGATGCAGATAAGAGTGATTCAGTTGGCACTTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTCGAGAGTGAAGGCATCAAGGGAGATGAGACTGGGTCACATACTTCCCAAAGTGAATCTGTCCCGGAGGCTCCGGAGACTGAGGCTGATAAGATGGGGAAAGAAGCTCCCAAGGAGAAACCAGCAGCTACAGAAGATGCCGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAGTTTGCTCAGCTCTTCCGCTCTCATGTGGGCATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACAGTAACTAGTGAGGAGGCTCAAGATCTCTTTGACAAGGCTGCTTCAAAGTTCCAGGAGGTAGCTGCTTTGGCTTTCTTCAATTGGGGAAACATTCATATGTGTGCGGCTAGAAAACGGATTCCCTTAGATGAGTCAGGTGAGAAGGAAAAAGTGGCAGAACAGCTTCAGGTGGCTTATGACTGGGTTAAGGAAAAATATTCGTTGGCAAGAAAGAAGTATGAGGAAGCCCTTTTAATAAAACCCGACTTCTATGAGGGATTGCTAGCCCTGGGACAGCAACAATTTGAAATGGCCAAACTTAACTGGTCATTTGCACTTGCTAAGAAGATGGATTTATCAGCCTGGGATTCTTCAGAGACACTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGGTGCAACTGAGATGTGGGAAAAGCTGGAGGAACAGAGGGCAAATGAACTAAAAGATCCTAGTGCAAGCAAGAAGGAGGAACTAATGAGAAGAAGGAAAAAACAGGGAGGTGCTACTGAGGGTGAGACCTCCGCGGTTGGTGGCCATGGTGAAATATCTGCAGAAGAAGCTGCTGAGCAAGCAGCAGTGATGAGATCACAGATTCACCTCTTCTGGGGGAATATGCTATTTGAAAGATCCCAAGTTGAATGCAAATTAGGGATGGGTGGTTGGAAGAAAAACCTGGATACAGCCGTGGAGCGTTTTAAACTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGGGATGCAAAGGAAGGAGATGAGAAAAAGATTGAGAACCCCCAACAACCCAGCAAGACTGATGAAACTGACAAGACCAGTGAGTGA 2304 0.4605 MGKSGGRKKKGGSNQVVADNSAPSANGGVDVDSSIFLKRALELKEEGNKRFQNKDYAGALEQYENALRLTPKNHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQYVRALLRRARSFEAIGKYEMAMQDVQGLLVADPNQRDALEIAQRLRTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVSKKGANSAGGLVAPANSKPEKSQPTSITENGPETKSQMPKVALKPSNVSARSMNARKENHNELSSHSSVIHGQHLDFAIRWRPLKLVYDHDIRLAQMPVNCNFRTLRDVVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESGADSHLIKEPDADKSDSVGTLRLHIVEVSPEQEPPLPEEEEVKPVESEGIKGDETGSHTSQSESVPEAPETEADKMGKEAPKEKPAATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKEKVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSAWDSSETLQLFDSAEEKMKGATEMWEKLEEQRANELKDPSASKKEELMRRRKKQGGATEGETSAVGGHGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKKNLDTAVERFKLAGASEADISLVLKNHCSNGDAKEGDEKKIENPQQPSKTDETDKTSE 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00639 767 SMART tpr_5 78 113 IPR019734 GO:0005515
Accr11g00639 767 SMART tpr_5 114 147 IPR019734 GO:0005515
Accr11g00639 767 SMART tpr_5 40 73 IPR019734 GO:0005515
Accr11g00639 767 PANTHER PROTEIN CLMP1 1 762 IPR044517 -
Accr11g00639 767 SMART PB1_new 283 375 IPR000270 GO:0005515
Accr11g00639 767 CDD PB1 286 372 - -
Accr11g00639 767 SUPERFAMILY CAD & PB1 domains 281 353 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 1 27 - -
Accr11g00639 767 Gene3D Tetratricopeptide repeat domain 37 168 IPR011990 GO:0005515
Accr11g00639 767 MobiDBLite consensus disorder prediction 628 655 - -
Accr11g00639 767 Coils Coil 609 629 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 220 248 - -
Accr11g00639 767 Gene3D - 285 354 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 737 767 - -
Accr11g00639 767 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Accr11g00639 767 MobiDBLite consensus disorder prediction 374 440 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 204 248 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 739 767 - -
Accr11g00639 767 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Accr11g00639 767 MobiDBLite consensus disorder prediction 383 400 - -
Accr11g00639 767 MobiDBLite consensus disorder prediction 628 668 - -
Accr11g00639 767 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Accr11g00639 767 MobiDBLite consensus disorder prediction 415 439 - -
Accr11g00639 767 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Accr11g00639 767 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00639 Accr-Chr11 9726431 9728734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00639 44 158 Calmodulin-binding Proteins AT3G25230 30.952 1.69e-09 59.3