Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00635 ATGAGTCAACTCGGGGTAATATTGCAGGAATCTCTTCAGAGAGAGCAAGAGGAAAGAACTATTCTGGGATTGTTAACGGAGCAAATGGATTCTGTGAATAGGGATAATCTTAGTGATAGAGAGCCCCGGAGGAGACGCAGTTTCAAAGAACGGCTAAGATTCACCGGAATGGGGTGTTGTGGGGCCACCTGGGGTTTCCGTCCGACGTCAGTACGGCACGATGAAGGAGGAGAGGAAGAAGAAGGCGACGAACGGCGGCAGCAGCAGCAAAGGCTCCAAGAGCCGAATCCCGGTCAAAGATCGAGCTCGTCAGACCCGGATTGTTTGAGCCCGAACACATCGGGTACGGGTATGAATCTTGCGGCGGCGTTGGCGGCGGAGCGTCAATTTCGGGGGACGCAAGAGCCGGAAGCTGAGAGGCAAGTAGCCGCCGGCGGGAACAATTTCCGGCGGGGAGGAGTAGGAGCAGAGCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGGGTGAAGGAGGCGACGCGGAGACGACGGTGACAGTGACAGAGAAGGAGAACGGAGGAGGAACGGGGAATGATACGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACTTTTTGCAGAGTGTGCTCCAGAGAGCTGTGGCTGAATCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCGAGATTCTCGACATCTTCTGA 744 0.5632 MSQLGVILQESLQREQEERTILGLLTEQMDSVNRDNLSDREPRRRRSFKERLRFTGMGCCGATWGFRPTSVRHDEGGEEEEGDERRQQQQRLQEPNPGQRSSSSDPDCLSPNTSGTGMNLAAALAAERQFRGTQEPEAERQVAAGGNNFRRGGVGAEPGTPWRVSLMRLLEEGEGGDAETTVTVTEKENGGGTGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00635 247 MobiDBLite consensus disorder prediction 91 117 - -
Accr11g00635 247 MobiDBLite consensus disorder prediction 71 90 - -
Accr11g00635 247 MobiDBLite consensus disorder prediction 131 160 - -
Accr11g00635 247 PANTHER OS01G0917900 PROTEIN 5 247 - -
Accr11g00635 247 SMART ring_2 199 236 IPR001841 -
Accr11g00635 247 Pfam Zinc finger, C3HC4 type (RING finger) 196 241 - -
Accr11g00635 247 MobiDBLite consensus disorder prediction 64 117 - -
Accr11g00635 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 247 IPR013083 -
Accr11g00635 247 SUPERFAMILY RING/U-box 195 244 - -
Accr11g00635 247 CDD RING-HC 199 236 - -
Accr11g00635 247 ProSiteProfiles Zinc finger RING-type profile. 199 237 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00635 Accr-Chr11 9679798 9680541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00635 43 247 C3H Transcription Factor Family AT4G22250 50.935 6.68e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00635 - - pcin:129286609 368.237