Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00617 ATGATCATCCTCCTCAAAATGGCCACACAACGAAACCCAACGCTACTCTTCTTGGTCTTTCTTCTCTTTCAGTTATGCATTTTCAAAATCAATGCCGAGTGCAAACCCAAGCATGGCTGCGACCTAGCTTTAGCTTCCTACTCCATTATTGAAGGAGAAAACACCAACCTCACTCGAATCAGCCAGCTCTTCAATCAGAATATTCCAGACATTCTCAAATTCAATCCCGATTTCCCAAACCCTAACAACACTACGGCAACCCTCCCAACCCAGATTCGACTGCGTGTTCCCTTCACGTGCCACTGCTTGAACCAAGATTTCTTAGCTCACACCTTCTCTTATACAATGCAGCGCGGCGATAACTACGGTTCGATTGCTCATAAGACTTTTGCCGGTCTCACCGATGAGCAGTGGGTGAGCCGATTCAACCTTCTCGATCCTAATCGGATACCCATCGGGACTCGGGTCAATGTTACTGTTAATTGCTCCTGTGGTGATGCTCACGTGTCCACCGATTTCGGGCTGTTCTTGACGTATCCAATTTTGCCCGGCGAGGGGTTGGCGAAGGCTGCGGCGGAGAATGGTATTCCGGCCGAGTTGCTTCAGAGGTACAATCCTGAGTCCGATTTCAGCGCCGGCCATCTGGTGTTTGTGCCGGCTACAGATGAAAATGGAAACTATCCACCATTGAAGTTGAGAGTAGGAATTTCTTGTGGAGCTATTGCTGGAATAGTTGTTGGAAGCATTTCTGGGATCTTACTCTTGGGACTACTATATTTCGGGCTATGTAGAAGAAGTAGAGTGGAAGATGTATCCCTTTTCACAAATCCACTTGCATTTGAAGGTTCAGGAAGCAGCTCAGAGAAGCTATCAGAATTGGCTGGTGTTGCTTCTCCTAGATTGTCAAATATTACTGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTTGCTGAAGCTACCAATGGCTTTAGTATGGCTAACATGATTGGACAAGGAGGCTTTGGATCTGTTTACTCTGCAAAACTTCGAAATGAGAAAGTGGCGATTAAGAAGATGGATATGCAAGCATCAAAAGAATTCCGTACTGAACTGAAGGTTCTTACCCATGTCCATCACCTAAACTTGGTACGCTTGATTGGATATTGTGTTAAGAGCTCCTTATTTTTGGTCTATGAGTACATTGAGAATGGAAATTTAAGCGAACATTTACGTGGCTCAGAGAGGGAAACATTAACATGGCCAAGTAGAGTGCAAATAGCCTTGGATGCAGCAAGAGGACTAGCATACATCCATGAGCAAACAGTTCCTGTGTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACGAAAATTTTCGAGGAAAGGTTGCAGATTTTGGTCAGACAAATTTGACAGAATCTGGAAGTTCTTCAATGCCATCACTTCTTGTGGGCACTTTTGGCTATATGCCTCCAGAATATGTAAAATATGGCAACTTTTCCCTCAAAACAGATGTATATGCATTTGGAGTTGTTCTCTATGAACTCATATCCGCAAAAGAAGCTATTGTGGAGACAAAAGAGCTTGCGAATGAATCGAAGGGACTAGTTGCCTTGTTTGAAGAGGTTCTGAATCAGCAAAACCCAGAAGAAGACCTTCGTCAACTTGTTGACCCCAGGCTCGGTGACAACTACCCTCTTGACTCAATATATAAGATGTGTCAGCTAGCGAAAGCTTGCACACAGGAAAATCCACAAGTAAGGCCAAGCATGAGATCAATTGTATTTGCATTGATGGTACTTTCGTCTTCAAGAGAGGACTGGGATGTGGGTTCATTCTATCCAAACCAAGCTCTCATTCATCTCGTGTCAGGAAGGTAA 1869 0.4414 MIILLKMATQRNPTLLFLVFLLFQLCIFKINAECKPKHGCDLALASYSIIEGENTNLTRISQLFNQNIPDILKFNPDFPNPNNTTATLPTQIRLRVPFTCHCLNQDFLAHTFSYTMQRGDNYGSIAHKTFAGLTDEQWVSRFNLLDPNRIPIGTRVNVTVNCSCGDAHVSTDFGLFLTYPILPGEGLAKAAAENGIPAELLQRYNPESDFSAGHLVFVPATDENGNYPPLKLRVGISCGAIAGIVVGSISGILLLGLLYFGLCRRSRVEDVSLFTNPLAFEGSGSSSEKLSELAGVASPRLSNITVDKSVEFSYEELAEATNGFSMANMIGQGGFGSVYSAKLRNEKVAIKKMDMQASKEFRTELKVLTHVHHLNLVRLIGYCVKSSLFLVYEYIENGNLSEHLRGSERETLTWPSRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDENFRGKVADFGQTNLTESGSSSMPSLLVGTFGYMPPEYVKYGNFSLKTDVYAFGVVLYELISAKEAIVETKELANESKGLVALFEEVLNQQNPEEDLRQLVDPRLGDNYPLDSIYKMCQLAKACTQENPQVRPSMRSIVFALMVLSSSREDWDVGSFYPNQALIHLVSGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00617 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 608 IPR044812 GO:0019199|GO:0045087
Accr11g00617 622 SUPERFAMILY Protein kinase-like (PK-like) 301 595 IPR011009 -
Accr11g00617 622 ProSiteProfiles Protein kinase domain profile. 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00617 622 FunFam PTI1-like tyrosine-protein kinase 3 395 608 - -
Accr11g00617 622 Gene3D Phosphorylase Kinase; domain 1 296 394 - -
Accr11g00617 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Accr11g00617 622 FunFam LysM receptor kinase 2 303 394 - -
Accr11g00617 622 SMART serkin_6 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00617 622 Pfam Protein tyrosine and serine/threonine kinase 326 592 IPR001245 GO:0004672|GO:0006468
Accr11g00617 622 Gene3D Transferase(Phosphotransferase) domain 1 395 604 - -
Accr11g00617 622 ProSiteProfiles LysM domain profile. 112 158 IPR018392 -
Accr11g00617 622 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00617 Accr-Chr11 9182296 9197976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00617 14 622 Receptor kinase-like Gene Family AT3G21630 52.097 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr11g00617 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00617 - K13429 gmx:100802308 736.487