Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00615 ATGGAGGTGGTTTTCTCAAACGTTTTTGAGGTTTCAAGGAAGAGAAAGGTTCGAAAGAGGCATAAGTATACTCCAAACTCTGAAGATGAAGACGACGTTCTATGTTGCTCTAAGAGGAAGCGTAATTCTTCATACAAGAGAGAGGATCAACCAAAGAAATCTATTGCTTCCTCGAAAAGGGAAAAAAATTTGCAAAATGATTTTTTCATTGATGATTTGGAAGATGAAGAAGAAGCCGTGGTTGCCAAGATAAGGTCCAGGAGAAGAGCTCAAAAAATGGACTCCATTATGGATAAAATAGGCCCAGAATCAAGTGCAGAGAGTCCATCCTCGGGCACTACCACATCGCATTCTCCACCAGCATCCGCATTGCCTTCTTCCGATTCGAGAAACCATACTGATTACGATTACATTGCAGCAAGTCGGAGGAATATCAAGAGAGGTAGCTGGATTTGTCATCAGTGCATGAAAAAGGATAGATTAAACTATGTCCCTTGCAGTAAATGTGAAAAGAAATTGTACTGTGATAAGTGCATCAAGCAATGGTATCCTGATATGACAGTAGCAGAAATTGTAGAGTGTTGCCCATTTTGCCGTAAAACTTGTAATTGCAATGCCTGCTTGTGCTCAAGTGGGGTGATTAAGACATCCATCAGGGATATCTCTGATGATGAGAAGTTTCAATATCTGCATTATTGTATCAACTTAGTTCGTCCATTTCTGAAACAAATGTGTGAAGAACAAGCTCTAGAGGAAGAGATCGAAGCTAGAATACAAGGGACATCACGCTCTGCGATTAAGATACTGCAAACTCCATGTAGTGATGAAGAACGTGTCTATTGCAACCATTGTGCTACTTCAATTGTTGACCTTCACCGCAGCTGCCCTGAGTGTTCCTATGAACTCTGCCTCCAATGTTGCCGAGAAGCTCGCAATGGGACTATTTTGCCTCGAGCTGAGATGAGGTTTCAGTATGTGAACAAGGGTTATGATTATATGCATGGTGGTGATCCTCTGCCAGAGTCTTGTGATTCCAAGAATTCCGATGATCCTTGTATTGAGCAATCTATTGAGTGGACTGCAGAAAGCAAGGGAAGTGTTTTTTGTGCCCCGGAGGAGTTTGGGGGATGTGGAAACTGCATGTTGGAGCTCAAGCATATTCTTCCACGGGGATGGATATCTGAACTGGAAGCTAAAGCTGGTGATTTGTTGAGAAAATGCGTGACTGAAAAAACTCTTCTGAAGCACAAAGCAGCAGCAGCATCAAGCTGCAACTACTCTGTGAGAAGAGCTGCTTCCAGAGAAGGCAGTGGTGACAATGACATATACTGCCCTTCTTCAGGGGAGATTATAAATGAGGGGTTATCAATCTTTCAAAGGCATTGGATCAATGGTGAACCTGTTATAGTTCGTGATGTTCTTCAACAAGCAACAGGTTTGAGCTGGGAGCCCATGGTAATTTGGAGGGCAGTATGTGCAGCTTCGAATTCAAAAATCAACCCAAAATTGTCGGAAGTTAAAACCATTGATTGTCTTGCAGGTTGTGAGGTAGAAATCAGCACTCACAAGTTCTTTAAAGGCTATGTGGAAGGAAGAACATATGGAAATCTCTGGCCAGAGATGTTAAAGCTAAAAGACTGGCCTCCCTCTGATAAGTTTGAAGATCTTTTGCCCCGCCACTGTGATGAGTTTATTTGCTCCTTACCATTTCAAGAATATACTGATCCTCGGGCTGGAATCCTCAATCTTGCTGTCAAGTTGCCAATGCATGTCTTGAAACCTGACATGGGTCCAAAAACATATATTGCTTATGGAATAAAAGAAGAACTTGGCAGAGGAGATTCTGTGACAAAGCTTCATTGTGACATGTCAGATGCGGTGAATATTTTGACCCATACAGCGGAAGTAAAGTTAAATGATGAGCAAAGGTTGTCTGTTTCACAGTTGAAAATAGCACATAAGGTCCAAGATGAAAAAGAGAAGTGCTGTGCTGAAATCAATGGAAATATCTCTCCAAATGATGTGCCTAAAGGGGTCACACTTCTTGATGTCACTGCAGAAAATGCAACAAGACAAGCAGGTGCTGCTCTTTGGGACATTTTCAGAAGAGAAGATACTGAGAAGTTAGAAACATATTTAAGAAAACACTCAAGAGAGTTTAGGCATACGTTTTGTTCTCCAGTTGAACAGGTTTTCCATCCCATTCATGATCAATGTTTTTATTTAACAATGGAGCACAAGAAGAAGCTGAAGGAGGAATTTGGTATTGAACCATGGACATTTGAGCAGAAACTTGGGGAGGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTCAGAAATCTCATGTCATGCACAAAAGTTGCTGCGGACTTTGTGTCCCCAGAAAATCTGGATGAGTGTCTGCGTTTAACTAATCAGTTCCGGCAGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAATAAGATGATAGTGTATGCTGCTGATCAAATTCTCAAAGATTTTGAATCCTTGCTCAAGTGTGTTTGA 2541 0.4176 MEVVFSNVFEVSRKRKVRKRHKYTPNSEDEDDVLCCSKRKRNSSYKREDQPKKSIASSKREKNLQNDFFIDDLEDEEEAVVAKIRSRRRAQKMDSIMDKIGPESSAESPSSGTTTSHSPPASALPSSDSRNHTDYDYIAASRRNIKRGSWICHQCMKKDRLNYVPCSKCEKKLYCDKCIKQWYPDMTVAEIVECCPFCRKTCNCNACLCSSGVIKTSIRDISDDEKFQYLHYCINLVRPFLKQMCEEQALEEEIEARIQGTSRSAIKILQTPCSDEERVYCNHCATSIVDLHRSCPECSYELCLQCCREARNGTILPRAEMRFQYVNKGYDYMHGGDPLPESCDSKNSDDPCIEQSIEWTAESKGSVFCAPEEFGGCGNCMLELKHILPRGWISELEAKAGDLLRKCVTEKTLLKHKAAAASSCNYSVRRAASREGSGDNDIYCPSSGEIINEGLSIFQRHWINGEPVIVRDVLQQATGLSWEPMVIWRAVCAASNSKINPKLSEVKTIDCLAGCEVEISTHKFFKGYVEGRTYGNLWPEMLKLKDWPPSDKFEDLLPRHCDEFICSLPFQEYTDPRAGILNLAVKLPMHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVKLNDEQRLSVSQLKIAHKVQDEKEKCCAEINGNISPNDVPKGVTLLDVTAENATRQAGAALWDIFRREDTEKLETYLRKHSREFRHTFCSPVEQVFHPIHDQCFYLTMEHKKKLKEEFGIEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAADFVSPENLDECLRLTNQFRQLPKNHRAREDKLEINKMIVYAADQILKDFESLLKCV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00615 846 CDD cupin_RmlC-like 732 781 - -
Accr11g00615 846 MobiDBLite consensus disorder prediction 22 61 - -
Accr11g00615 846 ProSiteProfiles JmjC domain profile. 576 809 IPR003347 -
Accr11g00615 846 SUPERFAMILY Clavaminate synthase-like 456 828 - -
Accr11g00615 846 FunFam Transcription factor jumonji domain-containing protein 439 818 - -
Accr11g00615 846 SMART cupin_9 557 809 IPR003347 -
Accr11g00615 846 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 35 842 IPR045109 GO:0032454|GO:0033169
Accr11g00615 846 MobiDBLite consensus disorder prediction 104 129 - -
Accr11g00615 846 Pfam JmjC domain, hydroxylase 695 792 IPR003347 -
Accr11g00615 846 MobiDBLite consensus disorder prediction 15 61 - -
Accr11g00615 846 MobiDBLite consensus disorder prediction 86 129 - -
Accr11g00615 846 ProSiteProfiles Zinc finger RING-type profile. 152 199 IPR001841 -
Accr11g00615 846 Gene3D Cupin 447 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00615 Accr-Chr11 9136342 9143632 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr11g00615 JmjC 3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00615 K15601 - gmx:100797860 1013.83