Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00600 ATGCTCCCCTCCTTAGGCTTCCCCGTTAATCTCTCCCGCCCCTCCGCCGAGCTTGACTTCTTTTCCGATCGCAACCACCCTCCTCCTCCCCCTCCGCCTCTTAAACCAGTCAAGAACGAGATTCCGACCCCCGATGTCAACACTGGCCTGCAGCTCCTTACTGCTCATACTGGCAGCGATCAGTCCACCGTCGACGACGGAGTTTCATCTGATGCTGAAATCAAGCGAGCCAAGAGTTCTACGGAGTTGTCACAACTGCAAGAGGAGCTACAGCGTATGAATGCGGAAAACGTGAAGCTGAGGGACATGTTGAGCCATGTGAGCGATAATTACAAGGCTCTGCAAATACATCTCGTTACATTAATGCAGCAGCAGCAACACCAACAGATTCAACATACCCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGATAAAAGAGAAGTTGTACCCATGCGGCTTTTGGAATTGGGACCTAGTAGCGGAACTGCTGAGGTAGATAATAACGAGGTGTCCAATTCAACTTCCGATGAAAGAACACAATCCACCACTCCTCCTCTTAACACCAACAATGGTAAAATGAATGAAAGGGAAGAGAGTCCAGACTCAGATGGTCACCCACATGGATGGGGCAATAGTGGTCCTAACAAGCTTCAGAAGCTGAACCCCTCATCATCCAACTCCGCCGACCCATCAACCGGTAGCGCCACGGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCTGAAGCACCCATGATCAGTGATGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTACTATAGATGCACCATGGCCGTCGGTTGCCCAGTTCGAAAACAAGTACAACGTTGCGCGGAGGACAGAACCATTTTGATAACCACCTACGAAGGAAGCCATAACCATCCACTGCCACCTGCGGCGATGGCGATGGCATCAACGACGACGGCAGCTGCAAGCATGTTGTTGTCAGGTTCAATGTCAAGTGCAGACGGGATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGTTCGTCTACCATGGCTACACTTTCTGCTTCGGCTCCATTTCCTACTATAACATTGGACCTCACTCACAATTCCAACAGTACCATGAACAATCCTATGCAATTCCAGAGATCGCCATTTCAAGTACCTAATTTCCCAGGGCAGCCTCAAGTTCAACCAACCGGATCGAGTCAGCATCATCAGTTGGCTCAGGCTTTTTCACAAGCACTTTACAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCAGGATATGGGTTCGTCCTCTTCATCTTCTTCCCAATTAGCTCACCAACCTCCCAGACCGGTGCAGCCAAACCAGCCGCCGCCAATGTCATCGTTGGCAGAAACTGTCAGCGCCGCCACTGCGGCCATCACCGTCGACCCGAATTTCACAGCGGCGCTCGCTGCCGCCATCTCCTCCATCATTAATAGCGGCGGTGTTCCCTCTGTCAATAACAACGGCAATAGCAGCGGCAATCCCAACATCACCGGTGGTACCACAATCAGTAGTTTCTCAGGGAATCAATAA 1614 0.5062 MLPSLGFPVNLSRPSAELDFFSDRNHPPPPPPPLKPVKNEIPTPDVNTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELSQLQEELQRMNAENVKLRDMLSHVSDNYKALQIHLVTLMQQQQHQQIQHTQSTANEVVRSKPDDKREVVPMRLLELGPSSGTAEVDNNEVSNSTSDERTQSTTPPLNTNNGKMNEREESPDSDGHPHGWGNSGPNKLQKLNPSSSNSADPSTGSATAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSTMATLSASAPFPTITLDLTHNSNSTMNNPMQFQRSPFQVPNFPGQPQVQPTGSSQHHQLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLAHQPPRPVQPNQPPPMSSLAETVSAATAAITVDPNFTAALAAAISSIINSGGVPSVNNNGNSSGNPNITGGTTISSFSGNQ 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00600 537 Pfam WRKY DNA -binding domain 262 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00600 537 FunFam probable WRKY transcription factor 31 245 322 - -
Accr11g00600 537 SUPERFAMILY WRKY DNA-binding domain 253 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00600 537 MobiDBLite consensus disorder prediction 164 196 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 24 39 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 18 46 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 509 537 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 217 241 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 442 476 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 129 254 - -
Accr11g00600 537 Coils Coil 69 103 - -
Accr11g00600 537 Gene3D WRKY domain 245 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00600 537 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 517 IPR044810 GO:0003700
Accr11g00600 537 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00600 537 MobiDBLite consensus disorder prediction 389 422 - -
Accr11g00600 537 MobiDBLite consensus disorder prediction 442 461 - -
Accr11g00600 537 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00600 Accr-Chr11 8992968 8995388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00600 16 505 WRKY Transcription Factor Family AT1G62300 52.519 2.86e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr11g00600 WRKY 5.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00600 - - pcin:129286757 616.69