Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00599 ATGATGCGTCTTGCTCTCGACTCTTCTCACACCCACGCCATGCTCCCCTCCTTAGGCTTCCCCGTTAATCTCTCCCGCCCCTCCGCCGAGCTTGACTTCTTTTCCGATCGCAACCACCCTCCTCCTCCCCCTCCGCCTCTTAAACCAGTCAAGAACGAGATTCCGACCCCCGATGTCAACACTGGCCTGCAGCTCCTTACTGCTCATACTGGCAGCGATCAGTCCACCGTCGACGACGGAGTTTCATCTGATGCTGAAATCAAGCGAGCCAAGAGTTCTACGGAGTTGTCACAACTGCAAGAGGAGCTACAGCGTATGAATGCGGAAAACGTGAAGCTGAGGGACATGTTGAGCCATGTGAGCGATAATTACAAGGCTCTGCAAATACATCTCGTTACATTAATGCAGCAGCAGCAACACCAACAGATTCAACATACCCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGATAAAAGAGAAGTTGTACCCATGCGGCTTTTGGAATTGGGACCTAGTAGCGGAACTGCTGAGGTAGATAATAACGAGGTGTCCAATTCAACTTCCGATGAAAGAACACAATCCACCACTCCTCCTCTTAACACCAACAATGGTAAAATGAATGAAAGGGAAGAGAGTCCAGACTCAGATGGTCACCCACATGGATGGGGCAATAGTGGTCCTAACAAGCTTCAGAAGCTGAACCCCTCATCATCCAACTCCGCCGACCCATCAACCGGTAGCGCCACGGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCTGAAGCACCCATGATCAGTGATGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTACTATAGATGCACCATGGCCGTCGGTTGCCCAGTTCGAAAACAAGTACAACGTTGCGCGGAGGACAGAACCATTTTGATAACCACCTACGAAGGAAGCCATAACCATCCACTGCCACCTGCGGCGATGGCGATGGCATCAACGACGACGGCAGCTGCAAGCATGTTGTTGTCAGGTTCAATGTCAAGTGCAGACGGGATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGTTCGTCTACCATGGCTACACTTTCTGCTTCGGCTCCATTTCCTACTATAACATTGGACCTCACTCACAATTCCAACAGTACCATGAACAATCCTATGCAATTCCAGAGATCGCCATTTCAAGTACCTAATTTCCCAGGGCAGCCTCAAGTTCAACCAACCGGATCGAGTCAGCATCATCAGTTGGCTCAGGCTTTTTCACAAGCACTTTACAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCAGGATATGGGTTCGTCCTCTTCATCTTCTTCCCAATTAGCTCACCAACCTCCCAGACCGGTGCAGCCAAACCAGCCGCCGCCAATGTCATCGTTGGCAGAAACTGTCAGCGCCGCCACTGCGGCCATCACCGTCGACCCGAATTTCACAGCGGCGCTCGCTGCCGCCATCTCCTCCATCATTAATAGCGGCGGTGTTCCCTCTGTCAATAACAACGGCAATAGCAGCGGCAATCCCAACATCACCGGTGGTACCACAATCAGTAGTTTCTCAGGGAATCAATAA 1653 0.5076 MMRLALDSSHTHAMLPSLGFPVNLSRPSAELDFFSDRNHPPPPPPPLKPVKNEIPTPDVNTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELSQLQEELQRMNAENVKLRDMLSHVSDNYKALQIHLVTLMQQQQHQQIQHTQSTANEVVRSKPDDKREVVPMRLLELGPSSGTAEVDNNEVSNSTSDERTQSTTPPLNTNNGKMNEREESPDSDGHPHGWGNSGPNKLQKLNPSSSNSADPSTGSATAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSTMATLSASAPFPTITLDLTHNSNSTMNNPMQFQRSPFQVPNFPGQPQVQPTGSSQHHQLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLAHQPPRPVQPNQPPPMSSLAETVSAATAAITVDPNFTAALAAAISSIINSGGVPSVNNNGNSSGNPNITGGTTISSFSGNQ 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00599 550 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00599 550 Pfam WRKY DNA -binding domain 275 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00599 550 MobiDBLite consensus disorder prediction 455 474 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 402 435 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 230 254 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 522 550 - -
Accr11g00599 550 SMART WRKY_cls 273 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr11g00599 550 MobiDBLite consensus disorder prediction 142 267 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 37 52 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 455 487 - -
Accr11g00599 550 Coils Coil 82 116 - -
Accr11g00599 550 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 530 IPR044810 GO:0003700
Accr11g00599 550 SUPERFAMILY WRKY DNA-binding domain 266 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00599 550 FunFam probable WRKY transcription factor 31 258 335 - -
Accr11g00599 550 Gene3D WRKY domain 258 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr11g00599 550 MobiDBLite consensus disorder prediction 177 209 - -
Accr11g00599 550 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00599 Accr-Chr11 8992968 8995427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00599 29 518 WRKY Transcription Factor Family AT1G62300 52.519 3.56e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr11g00599 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00599 - - pcin:129286757 616.69