Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00597 ATGGAGTGGAGTAGGGGCCACACGATCGGCCGGGGTTCCACCGCCACCGTATCGGTTGCTGAGTGTCGTCGATCTAGTCGGCTGTTTGCGGTGAAGTCGGTGGAGCTTCAACGGTCGGAATTGCTCAGGAGAGAACAGAGTATTCTCTCCACGTTGGAGTGTCCTCATGTTGTGGCATATGAAGGTTGTGACACCACATTTGAAAATGGTGCGTTCATGTATAACTTGTTCATGGAATACGCGCCTTACGGGTCAATCGCCGACGAAATTCGCGAGCGTGACGGTGGGTTGGATGAGGTTATGGTTGGACGTTATGCTCGTCAGATTCTTCTTGGGTTGAATTACTTACATTCCAATGGGATAGTGCATTGTGATTTGAAAGGCCAGAATATTCTGATTACCGATGAAGGGGCCAAAATTGCTGACTTGGGTTGTGCCCGGAGAGTTACGGCGGCGCCGGATTATGGTGGGGTGATTGCCGGTACTCCGGCGTTCATGGCACCGGAGGTGGCGCGTGGGGAGGAGCAGGGGTTCCCTGCTGACGTGTGGGCTCTTGGCTGTACTGTGCTAGAGATGATCACCGGAAAAGCGCCGTGGCATGACGTTTCCGACCCGGTGAGTGTCCTCTATCGGGTCGGGTTCTCCGGTGAGCTGCCGAAGATTGCGAATGGCTTGTCGGGGCAAGGAAAGGATTTTGTCACCATGTGTTTGAAAACAGATCCGAACGAGAGGTGGTCAGCAAGTGAGCTTCTCAAACATGAGTTCGTTCAGGATTCAAGCAATAAGTCGAAGAAATTTGATGATTCTAATTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGATTTCTGGTACTCGTTTGACGGGTCTCAGAAAACCCAAACACCGGATCCGAATCCAAACCCGACCCATGATCATGTGTTGTCTTGCCCCAGCAGTAGAATTGGTAGGTTGTCTTCCTCTATGCCCAATTGGGAATGTGAGGATGAATGGATCACAGTAAGAGAAATAAGCAACAGAGAGTCAGGGAGATTTTTCAATGGCAGAGAATCTAATGAAGAAACAGACAACTATGGATTAGACAGTTCAAATTACGTCAGGGAGGACAATTATTTGTTTGTTACTAATGAACCCAGAACAGTTAGTATAGTTGGATTGAGCGAATGTTGTAATATTGATGATGATTGTTGTATCAGAGAATCTTTATACATATGTTCACAGTGTATAAATATGGCTCTCAATAGAAATATTTTGCATGACTTGCTTGCAGCTTTCCTTTGTCTGTTGTTTCTACAGTTTCAATCCTGTGCAGTTAATGTGGTGAGAATGAATAACGGAAAAATTACTTATTAG 1353 0.4664 MEWSRGHTIGRGSTATVSVAECRRSSRLFAVKSVELQRSELLRREQSILSTLECPHVVAYEGCDTTFENGAFMYNLFMEYAPYGSIADEIRERDGGLDEVMVGRYARQILLGLNYLHSNGIVHCDLKGQNILITDEGAKIADLGCARRVTAAPDYGGVIAGTPAFMAPEVARGEEQGFPADVWALGCTVLEMITGKAPWHDVSDPVSVLYRVGFSGELPKIANGLSGQGKDFVTMCLKTDPNERWSASELLKHEFVQDSSNKSKKFDDSNSNSPTSVLLDRDFWYSFDGSQKTQTPDPNPNPTHDHVLSCPSSRIGRLSSSMPNWECEDEWITVREISNRESGRFFNGRESNEETDNYGLDSSNYVREDNYLFVTNEPRTVSIVGLSECCNIDDDCCIRESLYICSQCINMALNRNILHDLLAAFLCLLFLQFQSCAVNVVRMNNGKITY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00597 450 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00597 450 Gene3D Transferase(Phosphotransferase) domain 1 2 297 - -
Accr11g00597 450 MobiDBLite consensus disorder prediction 289 308 - -
Accr11g00597 450 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 345 - -
Accr11g00597 450 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Accr11g00597 450 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Accr11g00597 450 CDD STKc_MAPKKK 2 256 - -
Accr11g00597 450 Pfam Protein kinase domain 5 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00597 450 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00597 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00597 Accr-Chr11 8958571 8959923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00597 1 335 MAP Kinase Kinase Kinase AT2G32510 48.424 1.23e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr11g00597 Pkinase 3.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00597 K20716 - qsa:O6P43_031265 414.075