Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00571 ATGAGCGAATCAAATCACCACACAAATGACAAAGAGACAAGATCAGGTCAGAGGGATACCAACAGGGTACAATTCTCTGAAGATGAAGAGTCTCTCATTGCTAGGATGTTTAACTTGGTTGGAGACAGGTGGTCTCTTATAGCTGGCAGAATTCCAGGGAGGAGTGCTCAAGAGATTGAGAAGTATTGGACTTCAAAGTGCACTTCTTCTTCAACTGAAACATCAAGTTCTCATCATGCTGATGCTTAA 249 0.4217 MSESNHHTNDKETRSGQRDTNRVQFSEDEESLIARMFNLVGDRWSLIAGRIPGRSAQEIEKYWTSKCTSSSTETSSSHHADA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00571 82 Gene3D - 24 82 - -
Accr11g00571 82 Pfam Myb-like DNA-binding domain 22 63 IPR001005 -
Accr11g00571 82 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Accr11g00571 82 CDD SANT 25 63 IPR001005 -
Accr11g00571 82 SUPERFAMILY Homeodomain-like 22 66 IPR009057 -
Accr11g00571 82 SMART sant 21 69 IPR001005 -
Accr11g00571 82 MobiDBLite consensus disorder prediction 1 28 - -
Accr11g00571 82 FunFam MYB-like transcription factor 24 66 - -
Accr11g00571 82 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Accr11g00571 82 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 18 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00571 Accr-Chr11 8573095 8575105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00571 22 65 MYB Transcription Factor Family AT5G35550 59.091 2.61e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr11g00571 Myb_DNA-binding 4.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00571 - - sind:110012997 87.0409