Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00569 ATGGGCTGTCACAGTAGCAAGGAGAAGAAAAAATCAAAGGCGGAATTTAGTGGCTATGGATCTGCCACGGGTAGTACTGGAAGTACCCAGCAAAGTTACTACACCGTTTCGCCTCCTTCTACTCAAACCCAGACTCAGATTCGAGCATCAGAATCCAATCCCCAGCCCCCGCCGTCATCGCAGCCGCCTGTGACGGTCCCAGCGAAACCCTCCTACCTCCTGAATGTCAGAACCCCGCAGCAGAAGCCGGAAGCTACGATTCTGGAAAAGCCTCTTGAAGATGTTGAGAAATTCTACACTCTGGGCAAAGAACTTGGGAGAGGGCAATTTGGGATTACCTATTTGTGTACAGAGAATTCCACTGGCGACACTTATGCATGCAAATCGATATTGAAGAGGAAGCTTGTGTCTAAAGCGGATAAGGAAGATATGAAGAGGGAAATTCAGATTATGCAGCATTTATCTGGGCAACCCAACATTGTTGAGTTTAAGGGTACTTATGAAGATAGATATTCTGTGCATCTTGTAATGGAGCTCTGTGCTGGTGGGGAGCTATTTGATCGAATCATAGCTCAGGGTCACTATTCAGAGAGAGCTGCTGCGTCCATTTGCAGAGCTATTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAAAATTTCCTGCTCTCTAGCAAAGATGAGGGAGCAACGCTTAAGGCTACTGATTTTGGGCTATCCGTATTCATTGAAGAAGGGAAGGTTTACCGTGATATGGTAGGCAGTGCCTATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTACGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATGTTGTATATTCTCCTTAGTGGGGTCCCTCCTTTTTGGGCTGAAAATGAAAAGGGAATATTTGATGCTATATTGGAAGGAAAAATTGACTTTGAAAGTCAACCATGGCCCTCAATATCAGATAGTGCTAAAGATTTAGTCAGGAAGATGTTGACACAGGACCCAAAGAAGCGAATTACTTCTGCACAAGTCCTTGAACATCCATGGATCAGAGAAGGCGGAGAGGCATCAGATAAGCCAATTGACAGTGCAGTTCTGTTGAGAATGAAGCAATTCAGGGCAATGAATAAGCTCAAAAAGCTCGCACTGAAGGTCATTGCGGAAAATCTCTCTGAAGAAGAGATTAAAGGTCTCAAAGCAATGTTCACCAATATGGACACTGACAATAGTGGCTCTATCACCTATGAAGAACTGAAGACAGGTTTGGCCAGGATTGGATCACAACTATCTGAGGCTGAAGTGAAGCAACTTATGGAAGCTGCTGATGTTGATGGGAATGGAACGATTGACTATATCGAATTCATCTCAGCCACAATGCACAGGCACAGACTTGAGCGAGATGAACACTTATACAAAGCATTTCAGTATTTTGATAAGGATAACAGTGGGTATATTACTAGAGATGAATTGGAGAGTGCTATGACACAGCATGGAATGGGTGATGAAGCGACGATTAAGGAAATAATTTCTGAGGTGGATGCAGATAATGATGGGAGAATAAACTATGAGGAATTCTGCACAATGATGAGGAGTGGAATGCAACACCAAGGACAACTTTTTTAA 1644 0.4392 MGCHSSKEKKKSKAEFSGYGSATGSTGSTQQSYYTVSPPSTQTQTQIRASESNPQPPPSSQPPVTVPAKPSYLLNVRTPQQKPEATILEKPLEDVEKFYTLGKELGRGQFGITYLCTENSTGDTYACKSILKRKLVSKADKEDMKREIQIMQHLSGQPNIVEFKGTYEDRYSVHLVMELCAGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIMLYILLSGVPPFWAENEKGIFDAILEGKIDFESQPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWIREGGEASDKPIDSAVLLRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDNSGSITYEELKTGLARIGSQLSEAEVKQLMEAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELESAMTQHGMGDEATIKEIISEVDADNDGRINYEEFCTMMRSGMQHQGQLF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00569 547 Gene3D Phosphorylase Kinase; domain 1 101 184 - -
Accr11g00569 547 MobiDBLite consensus disorder prediction 1 15 - -
Accr11g00569 547 SMART efh_1 440 468 IPR002048 GO:0005509
Accr11g00569 547 SMART efh_1 511 539 IPR002048 GO:0005509
Accr11g00569 547 SMART efh_1 404 432 IPR002048 GO:0005509
Accr11g00569 547 SMART efh_1 476 504 IPR002048 GO:0005509
Accr11g00569 547 MobiDBLite consensus disorder prediction 18 54 - -
Accr11g00569 547 CDD EFh 479 537 IPR002048 GO:0005509
Accr11g00569 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 92 532 - -
Accr11g00569 547 Pfam EF-hand domain pair 475 537 IPR002048 GO:0005509
Accr11g00569 547 Pfam EF-hand domain pair 405 465 IPR002048 GO:0005509
Accr11g00569 547 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Accr11g00569 547 CDD EFh_PI-PLC 405 538 - -
Accr11g00569 547 MobiDBLite consensus disorder prediction 1 68 - -
Accr11g00569 547 ProSiteProfiles Protein kinase domain profile. 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00569 547 Gene3D - 365 543 - -
Accr11g00569 547 FunFam Calcium-dependent protein kinase 1 101 184 - -
Accr11g00569 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Accr11g00569 547 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Accr11g00569 547 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Accr11g00569 547 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Accr11g00569 547 FunFam Calcium-dependent protein kinase 1 365 540 - -
Accr11g00569 547 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Accr11g00569 547 ProSitePatterns Protein kinases ATP-binding region signature. 105 132 IPR017441 GO:0005524
Accr11g00569 547 SUPERFAMILY EF-hand 396 536 IPR011992 -
Accr11g00569 547 CDD STKc_CAMK 98 356 - -
Accr11g00569 547 SUPERFAMILY Protein kinase-like (PK-like) 85 378 IPR011009 -
Accr11g00569 547 ProSiteProfiles EF-hand calcium-binding domain profile. 508 542 IPR002048 GO:0005509
Accr11g00569 547 Gene3D Transferase(Phosphotransferase) domain 1 185 364 - -
Accr11g00569 547 FunFam calcium-dependent protein kinase 1 185 364 - -
Accr11g00569 547 SMART serkin_6 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00569 547 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Accr11g00569 547 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Accr11g00569 547 Pfam Protein kinase domain 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00569 Accr-Chr11 8558815 8562711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00569 1 547 EF-hand Containing Proteins AT4G04720 74.549 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr11g00569 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00569 K13412 - gmx:100812843 876.315