Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00552 ATGGATTGTTTCCCATGTTGCAATAAGCATGAACTTGAAATGGTTCCTTTGAGAAGAAATCCCATTGATTATGCACATTCCAGGAAATCCACTTTCAGATCTTTTCTTGCGGCTCTCTCTTCCAAAACAGGCAGGAGCAGACAAAGACACATTAAAGCCGAGATAAGAAAATATGGAACAGCGAAGAACAATATGCTTATCTTCACAGTTCAAGAACTGGCCTCTGCAACTGACAACTTCAATCCTGATCGTTTGATCGGTGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACTTACAAAGCATTGATCAAGCTGTGGCTGTGAAGCGACTGGACAGGAATAGATTGCAAGGAAGTAGAGAATTCTTTTCAGAAGTCATAACGTTGAGTTTGGTGAAGCACCCCAACCTCGTCAAGCTCATAGGTTATTGTGTCGAAGGAGACCAAAAGATGTTGGTTTATGAATTGATGGTCAATGGCAGCCTCGAAAGTCACCTTCTAGATTTAGAAGATAAGGAGGGACTGGATTGGGAAACGAGGATGAAAATAGCAGAAGGAGCAGCGAGAGGATTAGAGTACCTGCATGAAGAAGCAGATCCACCCATAATATACAGAGACTTGAAGGCATCCAACATACTTTTAGATGAGAACTTTAATGCGAAGCTGTCAGATTTTGGGCTGGCCAAGATGGGACCCACAGAAGAAGGAAAGGACCATGTGTCCACCAGGGTGATGGGCACTTTTGGGTATTGTTCACCTGAGTATGCTTTGACTGGTCGGGTCACTACCAAGTCCGATGTTTATAGTTTTGGAGTCGTTTTAATGGAGATCATCACCGGAAGGAGAGTCTATGATACTTCTAGAGAAGAAGAAGAGCAAAACCTTATTGACTGGGTACAGCCACTGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTGTTAAAGGATAAGTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGGAAGAAGAAGCAGACACAAGACCTTTAATGAGTGATGTAGTAACAGCGCTTCAGCACATTATGATCCCAGTAAAAAATAATAATGGTGAATTAAACAAAGGAGAATCTGTAAAAATTGCAGGCCATGTTGAGTCATTTAGGATAGGAAGCTCACGTGTAGACAACAACAATAATCTACAACATCAAGAAACAAGAATTGCAAGTTCAAGTGTGGGCCATCATCAACATCAGAGGGTTGGAAATTCAAGTGTAGACCATCAGCAATTGTATCAACATCATGGGTGA 1296 0.4236 MDCFPCCNKHELEMVPLRRNPIDYAHSRKSTFRSFLAALSSKTGRSRQRHIKAEIRKYGTAKNNMLIFTVQELASATDNFNPDRLIGEGGFGSVYKGYLQSIDQAVAVKRLDRNRLQGSREFFSEVITLSLVKHPNLVKLIGYCVEGDQKMLVYELMVNGSLESHLLDLEDKEGLDWETRMKIAEGAARGLEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTEEGKDHVSTRVMGTFGYCSPEYALTGRVTTKSDVYSFGVVLMEIITGRRVYDTSREEEEQNLIDWVQPLLEDREKFTLMADPLLKDKFPVKGLFKALAVAAMCLEEEADTRPLMSDVVTALQHIMIPVKNNNGELNKGESVKIAGHVESFRIGSSRVDNNNNLQHQETRIASSSVGHHQHQRVGNSSVDHQQLYQHHG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00552 431 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 53 156 - -
Accr11g00552 431 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Accr11g00552 431 MobiDBLite consensus disorder prediction 403 431 - -
Accr11g00552 431 ProSiteProfiles Protein kinase domain profile. 80 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00552 431 Gene3D Transferase(Phosphotransferase) domain 1 157 377 - -
Accr11g00552 431 FunFam Serine/threonine-protein kinase PBS1 157 372 - -
Accr11g00552 431 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Accr11g00552 431 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Accr11g00552 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Accr11g00552 431 Pfam Protein kinase domain 82 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00552 431 SMART serkin_6 80 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00552 431 CDD STKc_IRAK 86 357 - -
Accr11g00552 431 PANTHER OS07G0668900 PROTEIN 30 360 - -
Accr11g00552 431 MobiDBLite consensus disorder prediction 403 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00552 Accr-Chr11 8329780 8334061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00552 1 354 Glycoside Hydrolase AT3G07070 56.944 1.73e-135 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr11g00552 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00552 - - pcin:129285479 717.613