Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00531 ATGGCTGCCTCCCACCAATCTCTCCTTGAGAAACCGAAAACATCAATTTCCAGAACCATTTGGCTTCTTCTCTCTCTAGCTGCTCTCTTCAGCTCTGCTCTTTTTGCTTCCTATCTCTTCTCACCCTCCTCCTTCATCTTCAACCTCTCCCACCCTCACCACATCTGCAACCATGCCATCGACAAATCGTCATGCTTGTCCCATATCTCTGAATTACCCAAAGTTTCAGTCTTTGCCTCTAAAGACGAAGAATCATCCCACTTACTTCAATCCTTCTTGATGAAAACCACCTCACAAATCCAGAAAACTCTGGACTCAACAAGAGCCGTCAAATACAGAATCAACGGTCCAAAACAGCAACAAGCTCTGCAAATGTGTGAGCAGCTTCTGGACTTGTCTCTTGAAAGAGTTTGGGACTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCTACCAAGATACTCACACTTGGCTCAGCACTGTCCTCACTAATCACATCACTTGCTTGGATGAGTTAGAAGGATCAGCTCGAGCCCTTATAGAGTCTGAGCTCAATGACTTAGTCTCCAGAGCCAGAACCTCCCTAGCCTTGCTTGTTCATGTTATGCCCTCTCAAATTGAAGCCGTCGATGAGCCACTTAACGGTGAGTTTCCCTCGTGGGTGACGAGTAAGGACAGGAAGCTTCTGGAAGCATCTGCTAACGATATAAAGGCCAACGTCGTGGTGGCTAAGGATGGAAGTGGGAGGTTTAAGACTGTGAAAGAGGCTGTGGCTTCAGCACCAGATAACAGTAAGACAAGGTATGTGATATATGTGAAGAAGGGCGTTTATAAAGAGAATGTTGAGATTGGATCAAAGAAGAAGAATGTGATGCTGGTGGGTGATGGTAAAGATGCGACGATCATCACCGGAAGTTTGAATTTCGTTGATGGAACATCCACCTTCAGAACTGCCACCGTTGCTGCGGTTGGGGATGGATTCATAGCCCAAGACATATGGTTCCAGAACACGGCTGGCCCTCAGAAGCACCAAGCGGTGGCTCTGCGCGTCGGCGCCGATCTCTCAGTCATCAACCGCTGCCGTGTGGAGGCCTACCAAGACACACTATACGCCCACTCCAACAGGCAATTCTACCGTGACTCCATAATCTCAGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTGGTGTTCCAGAAATGCTTCCTAGAGGCCCGAAAGCCCATGAATAACCAGAACAACATGGTCACAGCTCAAGGACGCGAAGACCCAAACCAGAACACTGGCACTTCAATCCAACAATGTAACTTAACACCAAGCTCTGATCTCAAGCCAGTCATAGGGTCGATCAAAACCTTTCTGGGTCGTCCATGGAAGGAATATTCTAGAACTGTGGTGATGCAATCTTTCCTGAGTACCCATATTGATCCAGCAGGGTGGGCTCCATGGGATGATAAGCAATCGACTCTGAAGAATTTGTACTATGGAGAGTACAAAAACAAAGGACCTGGTGCTGGGACTTCTAAGAGAGTGAAATGGCCTGGTTATCATGTGATTACAAGTGCGGCTGAGGCGAGCAAGTTCACGGTGGCTCAGCTCATTCAAGGTGGCACTTGGCTTAAGAACACTGGTGTTGCTTACATTGAAGGGCTCTAA 1659 0.4804 MAASHQSLLEKPKTSISRTIWLLLSLAALFSSALFASYLFSPSSFIFNLSHPHHICNHAIDKSSCLSHISELPKVSVFASKDEESSHLLQSFLMKTTSQIQKTLDSTRAVKYRINGPKQQQALQMCEQLLDLSLERVWDSMVALTEKTTKSYQDTHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTSLALLVHVMPSQIEAVDEPLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGRFKTVKEAVASAPDNSKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGKDATIITGSLNFVDGTSTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVEAYQDTLYAHSNRQFYRDSIISGTVDFIFGNAAVVFQKCFLEARKPMNNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVIGSIKTFLGRPWKEYSRTVVMQSFLSTHIDPAGWAPWDDKQSTLKNLYYGEYKNKGPGAGTSKRVKWPGYHVITSAAEASKFTVAQLIQGGTWLKNTGVAYIEGL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00531 552 PANTHER PECTINESTERASE 35 542 - -
Accr11g00531 552 CDD PMEI-like_4 58 200 - -
Accr11g00531 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 202 IPR035513 -
Accr11g00531 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 195 IPR035513 -
Accr11g00531 552 SMART PMEI_2 41 198 IPR006501 GO:0004857
Accr11g00531 552 Pfam Plant invertase/pectin methylesterase inhibitor 53 187 IPR006501 GO:0004857
Accr11g00531 552 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Accr11g00531 552 NCBIfam pectinesterase inhibitor domain 48 178 IPR006501 GO:0004857
Accr11g00531 552 Pfam Pectinesterase 240 537 IPR000070 GO:0030599|GO:0042545
Accr11g00531 552 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Accr11g00531 552 Gene3D - 234 552 IPR012334 -
Accr11g00531 552 FunFam Pectinesterase 234 552 - -
Accr11g00531 552 SUPERFAMILY Pectin lyase-like 238 551 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00531 Accr-Chr11 8004513 8006592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00531 1 552 Carbohydrate Esterase AT1G11580 55.872 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00531 K01051 - gmx:100815836 799.275