Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr11g00530 | ATGGCTATGGCTTCTCCCAACCAGTCCCTTCTTGACAAACCCAATAAATCAATCTCCAAAACCATCTGGCTTCTTCTCTCTCTATCTGCTCTCTTCAGCTCTGCTCTGTTCGCTTCTTATCTCTTCTCACCCACCTCCTTCATCTTCAACCTCTCTCACCCTCATCACCATCTCTGTGACCATGCCCTTCACAAATCATCATGCCTTGCCCACCTCTCTGAACTAACTCAAGCTTCAACCTTTACTACCTCCAACGACCTAAACTCCAAATTGCTTCACTCTCTCCTCACCAAAACCACCTCACAAATCCAAAAGACTTTGGACTCAACCAAAGCCATCAAATACAGAATCAACGATCCCAAACAGCAGCAAGCTTTGCAAGTCTGTGAGCAACTCCTAGAATTGTCCCTCGATAGAGTTTGGGACTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCAACCAAGATGCTCACACTTGGCTCAGCACTGTCCTCACTAATCACGTCACTTGCCTTGATGAGGTAGAAGGATCAGCTCGAGCCCTTATTGAATCTGACCTCAATGACTTAGTCTCGAGAGCCAGAACCTCCCTAGCCTTGCTTGTTCACGTTATGCCCTCTAAAATTGATGTCGTTGATGAGCAACTTAATGGTGAGTTTCCCTCATGGATAACGAGTAAGGACAGGAAGCTTCTAGAAGCTCCTTCTAATGATATAAAGGCGAACGTTGTGGTGGCTAAGGATGGAAGTGGGAGGTTTAAGACTGTGGGCGAAGCTGTAGCTTCGGCCCCAGATAACAGTAAGACGAGGTATGTGATATATGTGAAGAAGGGAGTTTACAAAGAGAATGTTGAGATTGGATCCACGAAGAAGAATGTGATGCTGGTGGGTGACGGTATGGATTCGACCATCATCACCGGAAGTTTGAATTTTGTCGATGGAACACCCACCTTTAAAACGGCCACCGTCGGTATGGATCCTAAAACCTCTGTAGTTAGTTTTCATCATCTCCATTGTTTTTATTGA | 1029 | 0.4558 | MAMASPNQSLLDKPNKSISKTIWLLLSLSALFSSALFASYLFSPTSFIFNLSHPHHHLCDHALHKSSCLAHLSELTQASTFTTSNDLNSKLLHSLLTKTTSQIQKTLDSTKAIKYRINDPKQQQALQVCEQLLELSLDRVWDSMVALTEKTTKSNQDAHTWLSTVLTNHVTCLDEVEGSARALIESDLNDLVSRARTSLALLVHVMPSKIDVVDEQLNGEFPSWITSKDRKLLEAPSNDIKANVVVAKDGSGRFKTVGEAVASAPDNSKTRYVIYVKKGVYKENVEIGSTKKNVMLVGDGMDSTIITGSLNFVDGTPTFKTATVGMDPKTSVVSFHHLHCFY | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr11g00530 | 342 | Gene3D | - | 237 | 335 | IPR012334 | - | |
Accr11g00530 | 342 | Pfam | Plant invertase/pectin methylesterase inhibitor | 57 | 190 | IPR006501 | GO:0004857 | |
Accr11g00530 | 342 | Pfam | Pectinesterase | 243 | 328 | IPR000070 | GO:0030599|GO:0042545 | |
Accr11g00530 | 342 | NCBIfam | pectinesterase inhibitor domain | 56 | 180 | IPR006501 | GO:0004857 | |
Accr11g00530 | 342 | ProSitePatterns | Pectinesterase signature 1. | 268 | 287 | IPR018040 | - | |
Accr11g00530 | 342 | SUPERFAMILY | Pectin lyase-like | 241 | 326 | IPR011050 | - | |
Accr11g00530 | 342 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 56 | 205 | IPR035513 | - | |
Accr11g00530 | 342 | PANTHER | PECTINESTERASE | 40 | 327 | - | - | |
Accr11g00530 | 342 | CDD | PMEI-like_4 | 66 | 203 | - | - | |
Accr11g00530 | 342 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 57 | 190 | IPR035513 | - | |
Accr11g00530 | 342 | SMART | PMEI_2 | 50 | 201 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr11g00530 | Accr-Chr11 | 7961221 | 7962249 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr11g00530 | 3 | 327 | Carbohydrate Esterase | AT1G11580 | 44.311 | 8.36e-79 | 249 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr11g00530 | K01051 | - | gmx:100815836 | 376.326 |