Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00529 ATGGCTATGGCTTCTCCCAACCAGTCCCTTCTTGACAAACCCAATAAATCAATCTCCAAAACCATCTGGCTTCTTCTCTCTCTATCTGCTCTCTTCAGCTCTGCTCTGTTCGCTTCTTATCTCTTCTCACCCACCTCCTTCATCTTCAACCTCTCTCACCCTCATCACCATCTCTGTGACCATGCCCTTCACAAATCATCATGCCTTGCCCACCTCTCTGAACTAACTCAAGCTTCAACCTTTACTACCTCCAACGACCTAAACTCCAAATTGCTTCACTCTCTCCTCACCAAAACCACCTCACAAATCCAAAAGACTTTGGACTCAACCAAAGCCATCAAATACAGAATCAACGATCCCAAACAGCAGCAAGCTTTGCAAGTCTGTGAGCAACTCCTAGAATTGTCCCTCGATAGAGTTTGGGACTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCAACCAAGATGCTCACACTTGGCTCAGCACTGTCCTCACTAATCACGTCACTTGCCTTGATGAGGTAGAAGGATCAGCTCGAGCCCTTATAGAATCTGACCTCAATGACTTAGTCTCGAGAGCCAGAACCTCCCTAGCCTTGCTTGTTCACGTTATGCCCTCTAAAATTGATGGCGTTGATGAGCAACTTAATGGTGAGTTTCCCTCATGGGTAACGAGTAAGGACAGGAAGCTTCTGGAAGCTTCTGCTAATGATATAAAGGCGAACGTTGTGGTGGCTAAGGATGGAAGTGGGAAGTTTAAGACTGTGAAGGAAGCCGTGGCTTCAGCACCAGATAACAGTAAGACGAGGTATGTGATATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGAGATTGGATCCAAGAAGAAGAATGTGATGCTGGTGGGTGACGGTATGGATTCCACCATCATCACCGGAAGTTTGAATTTCGTCGACGGAACATCCACCTTTAAAACGGCCACCGTCGCTGCTGTTGGGGATGGATTCATAGGGCAAGACATATGGTTCCAAAATACTGCAGGTCCTCAGAAGCACCAAGCGGTGGCTCTCCGCGTCGGCGCCGATCTCTCAGTCATCAACCGCTGCCGTGTGGATGCCTACCAAGACACTCTATACGCCCACAGCAACCGGCAATTCTACCGGGACTCCTTCATCACCGGCACCGTGGACTTCATCTTCGGCAACGCCGCAGTGGTGTTCCAAAAGTGCAACATCGTGGCCCGTAAGCCCATGAATGGTCAGAACAACATGGTCACAGCTCAAGGACGCGAAGACCCAAACCAAAACACAGGCACTTCAATCCAGCAATGTAACCTAACACCAAGCTCCGATCTCAAGCCAGTCATTGGCTCAATCAAAACCTTTCTGGGTCGTCCATGGAAGGAATATTCCAGAACTGTATTGATGCAATCATTTTTGGATAGCCATATTGATCCAGCAGGATGGGCTCCATGGGACGATAAACAATCGACTCTGAAGAATTTGTATTATGGAGAGTACATGAACAATGGACCTGGTTCTGGTGTTGCCAAGAGAGTGAAGTGGCCTGGTTATCATGTGATTACAAGTGCTTCTGAAGCAAGCAAGTTCACGGTGGCTCAGCTCATTCAAGGTGGCACATGGCTTAAGAACACCGGCGTCGCCTTCATTGAAGGGCTCTAG 1668 0.4796 MAMASPNQSLLDKPNKSISKTIWLLLSLSALFSSALFASYLFSPTSFIFNLSHPHHHLCDHALHKSSCLAHLSELTQASTFTTSNDLNSKLLHSLLTKTTSQIQKTLDSTKAIKYRINDPKQQQALQVCEQLLELSLDRVWDSMVALTEKTTKSNQDAHTWLSTVLTNHVTCLDEVEGSARALIESDLNDLVSRARTSLALLVHVMPSKIDGVDEQLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGKFKTVKEAVASAPDNSKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGMDSTIITGSLNFVDGTSTFKTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAYQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNIVARKPMNGQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVIGSIKTFLGRPWKEYSRTVLMQSFLDSHIDPAGWAPWDDKQSTLKNLYYGEYMNNGPGSGVAKRVKWPGYHVITSASEASKFTVAQLIQGGTWLKNTGVAFIEGL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00529 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Accr11g00529 555 Gene3D - 237 555 IPR012334 -
Accr11g00529 555 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
Accr11g00529 555 NCBIfam pectinesterase inhibitor domain 56 180 IPR006501 GO:0004857
Accr11g00529 555 SUPERFAMILY Pectin lyase-like 241 554 IPR011050 -
Accr11g00529 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 205 IPR035513 -
Accr11g00529 555 SMART PMEI_2 50 201 IPR006501 GO:0004857
Accr11g00529 555 Pfam Pectinesterase 243 540 IPR000070 GO:0030599|GO:0042545
Accr11g00529 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 189 IPR035513 -
Accr11g00529 555 Pfam Plant invertase/pectin methylesterase inhibitor 57 189 IPR006501 GO:0004857
Accr11g00529 555 CDD PMEI-like_4 66 203 - -
Accr11g00529 555 FunFam Pectinesterase 237 555 - -
Accr11g00529 555 PANTHER PECTINESTERASE 40 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00529 Accr-Chr11 7961221 7970187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00529 3 555 Carbohydrate Esterase AT1G11580 56.584 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00529 K01051 - gmx:100815836 795.038