Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00528 ATGGAGGACACAGCTGAAATGGTGGGAAGGGCATTTGTGGATCATTACTACCACTTGTTTGATAATGATAGAGCTTCACTGTCTTCTCTGTATAGGGACACCTCTATGTTGACCTTTGAGGGACAGAAATTTGCTGGCTCCACTGAAATCTCCTCCAAGCTCACCCAACTGCCGTTGGATCAATGCCGGCACGTGATCAGCACTGTCGACTCTCAGCCGTCATCCCCAACCGGAGGAGGCGGTATTGTTGTCTTCGTCAGTGGCAGCCTCCAGTTGGCCGGAGAGGAGCATCACCTCAGGTTTAGCCAGATGTTTCACTTGATTCCAACAGCAGAAGGAAGCTTCTATGTGCAGAATGACATGTTTCGTCTCAGCTATGGTTAA 384 0.4948 MEDTAEMVGRAFVDHYYHLFDNDRASLSSLYRDTSMLTFEGQKFAGSTEISSKLTQLPLDQCRHVISTVDSQPSSPTGGGGIVVFVSGSLQLAGEEHHLRFSQMFHLIPTAEGSFYVQNDMFRLSYG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00528 127 ProSiteProfiles Nuclear transport factor 2 domain profile. 8 124 IPR018222 -
Accr11g00528 127 FunFam Nuclear transport factor 2 1 127 - -
Accr11g00528 127 SUPERFAMILY NTF2-like 4 124 IPR032710 -
Accr11g00528 127 CDD NTF2 4 124 IPR018222 -
Accr11g00528 127 Pfam Nuclear transport factor 2 (NTF2) domain 8 124 IPR002075 -
Accr11g00528 127 Gene3D - 1 127 - -
Accr11g00528 127 PANTHER NUCLEAR TRANSPORT FACTOR 2 5 126 IPR045875 GO:0006913
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00528 Accr-Chr11 7952312 7953018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00528 1 95 MAP Kinase Kinase Gene Family AT5G40440 31.132 2.69e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00528 - - pdul:117625734 207.223