Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00522 ATGGCTGCTTCTGGACATTCTTCCACTGATGAAGTCTTGGAGAACGTTCAAGAGGAGACCAGCAAAGAATCAAAGCTAGAATTTTCCAGCGATGAGGAAGATTTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGGATTTAATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAAATTGAAAAGTACTGGACTGCTAGACACTCAACAAGTGAATGA 225 0.4133 MAASGHSSTDEVLENVQEETSKESKLEFSSDEEDLIIRMYNLVGERWDLIAGRIPGRTAEEIEKYWTARHSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00522 74 MobiDBLite consensus disorder prediction 12 29 - -
Accr11g00522 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Accr11g00522 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Accr11g00522 74 FunFam MYB-like transcription factor 27 69 - -
Accr11g00522 74 SUPERFAMILY Homeodomain-like 27 67 IPR009057 -
Accr11g00522 74 Pfam Myb-like DNA-binding domain 27 66 IPR001005 -
Accr11g00522 74 MobiDBLite consensus disorder prediction 1 29 - -
Accr11g00522 74 CDD SANT 27 66 IPR001005 -
Accr11g00522 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 69 - -
Accr11g00522 74 SMART sant 24 72 IPR001005 -
Accr11g00522 74 Gene3D - 27 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00522 Accr-Chr11 7921841 7922435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00522 29 66 MYB Transcription Factor Family AT3G13540 68.421 3.29e-14 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr11g00522 Myb_DNA-binding 8.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00522 - - pcin:129298854 130.568