Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00521 ATGGCTGCTTCTGGACATTCTTCCACTGATGAAGTCTTGGAGAACGTTCAAGGTTGCTGGTCCTTTTCAGAGGAGACCAGCAAAGAATCAAAGCTAGAATTTTCCAGCGATGAGGAAGATTTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGGATTTAATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAAATTGAAAAGTACTGGACTGCTAGACACTCAACAAGTGAATGA 243 0.4198 MAASGHSSTDEVLENVQGCWSFSEETSKESKLEFSSDEEDLIIRMYNLVGERWDLIAGRIPGRTAEEIEKYWTARHSTSE 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00521 80 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Accr11g00521 80 SUPERFAMILY Homeodomain-like 10 74 IPR009057 -
Accr11g00521 80 Gene3D - 33 75 - -
Accr11g00521 80 FunFam MYB-like transcription factor 33 75 - -
Accr11g00521 80 Pfam Myb-like DNA-binding domain 33 72 IPR001005 -
Accr11g00521 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 33 75 - -
Accr11g00521 80 CDD SANT 33 72 IPR001005 -
Accr11g00521 80 SMART sant 30 78 IPR001005 -
Accr11g00521 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 80 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00521 Accr-Chr11 7921841 7922435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00521 35 74 MYB Transcription Factor Family AT5G35550 65.000 3.37e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr11g00521 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00521 - - pcin:129298854 124.02