Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00502 ATGATTCGCTTCCTGAATTCTATCACGCCATTTCTGCTCTTTTGTCTTGTAATCCTTTTGTTTCCTAGAATCATCAAAGGACAGCAATATTGTTTAGGCACAACTTATGCCCCGAACAGCACATACCACACAAATCTTATTCGCTTACTTTCTTCCCTTTCCTCAAACGCCATTCGAAGTAATGGATTTTACAACACCACCGTCGGACAAAACAGCGATAACACCGTCTACGGCCTCTTCCTCTGCCGTGGAGACGTCACCATTGCGGCTTGTGACAGATGCGTTTCCACAGCAATCAAAGATATCACAACCCCTCAGAAATGCCCCAATACTACACAAGCCGTGGGTTGGTACCGCTACGAGTGCATGATACGATACTCCGACACGTATATCTTCTCCGTAGAAGATGCCAACCCCTTGGGTATCTTTCATAACATCGCTAATGCAACAGACCAAAGGGGTTTTATGAAACTGGTGCTTGATACCCTGAATGCGGTGGCCAAACAAGCTGCGTATGGTGGCGGTGGCAAGAAATTTGCGACCAAAGAAGTAAACTATAGCTATTTTCAAACTATATATTCTATGGTGCTGTGCACGCCGGATTTATCTCCAGATGATTGTTATACCTGTTTTAGAGGATTAACTGCACAGTACCAGACTTGCTGTTTTGGGAAGATAGGGGGAGTAGTTCTTGCCGCCAGTTGTACTGTAAGGTATGAAGTGTACCCCTTTTATAGAATCACTTTGCCACCGCCATCTCCTCCACCAATGCTGCCGCCAGAGACCCCTCCCAATGATAGGAGAAAGATCTCAGGTGGGATAATTATGGCCATAGTTGTTCCAACAGTGATATTCATATTGCTTGTCTCTCTCTGCTTCTTCTGCCTGATCAAGAGGAGAGCAAAAAAGAAGGATTCCTCATTTCCCAAACAAAGTGATGAATCGCTGCAATTTGATTTGGATGTCATCAAATCAGCTACGAACAACTTCTCTCCTGACAATAAACTAGGTCAAGGAGGATTTGGTGAAGTATACAAGGGTATCCTACCTGGTGGACAAGAGTTGGCTGTGAAGAGGTTATCAATTAGCTCCAAACAAGGTGTAGAACAATTTAAAAATGAAGTTGTTACTATGGCAAAACTTCAACATAGAAATCTTGTAAGGCTACTAGGATTCTGCTTGGATGAGGAGGAAAAGATACTCATATATGAATTTCTGCCCAAAAAAAGCCTGGATAGATTTCTCTTTGAACCTGGAAATAGAGGCGAATTGAATTGGTCAAAGCGTTATAAGATTATTGAAGGCATTGTAAGGGGGTTGCTTTATCTTCACGAAGATTCTCGACTCAAAATTATCCACCGTGACCTCAAAGCTAGTAATGTATTGTTGGACGAAAATTGGAATCCAAAAATTTCTGATTTTGGTATGGCCAGAATTTTTGGAGTCGATCAATCCCAAGCAGACACGAGTAGAGTCATGGGTACATATAGTTATATGGCTCCAGAATATGCTATGCATGGTCAGATTTCAGTCAAATCCGATATATATAGTTTTGGTGTCTTGACCCTTGAGATTATCTCTGGCAAAAAGAATACATCTTTCTACATATCAAGTTGTGCTGAAGACTTGTTAAGCTATGCTTGGAAGCTGTGGAAGAAAGGGACGCCATTAGAATTGCTGGATCCTAGTCTAAGAGATTCTTATTCAAGAAACCAAGTCATTAAATGCATTCATATGAGCTTGTTGTGTGTTCAGGAAAGCCAAGCTCAGAGACCTACAGTACAATCCATTTTGGTGATGTTAGGTAGTGACTCTGTGACCCTACCAGACCCTGAAGAGCCAGCATTTTTTGTCGATCATAGTGGACCAAATTCAAACAAACCCGCCATAATTGATGGAAACAAGTCCGATCAATCAACAAGCGGGTCTGTGCAATGGTCTGTGGATAAAGATCCGATTACTGACTTATACCCTCGCTAG 1980 0.4207 MIRFLNSITPFLLFCLVILLFPRIIKGQQYCLGTTYAPNSTYHTNLIRLLSSLSSNAIRSNGFYNTTVGQNSDNTVYGLFLCRGDVTIAACDRCVSTAIKDITTPQKCPNTTQAVGWYRYECMIRYSDTYIFSVEDANPLGIFHNIANATDQRGFMKLVLDTLNAVAKQAAYGGGGKKFATKEVNYSYFQTIYSMVLCTPDLSPDDCYTCFRGLTAQYQTCCFGKIGGVVLAASCTVRYEVYPFYRITLPPPSPPPMLPPETPPNDRRKISGGIIMAIVVPTVIFILLVSLCFFCLIKRRAKKKDSSFPKQSDESLQFDLDVIKSATNNFSPDNKLGQGGFGEVYKGILPGGQELAVKRLSISSKQGVEQFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPKKSLDRFLFEPGNRGELNWSKRYKIIEGIVRGLLYLHEDSRLKIIHRDLKASNVLLDENWNPKISDFGMARIFGVDQSQADTSRVMGTYSYMAPEYAMHGQISVKSDIYSFGVLTLEIISGKKNTSFYISSCAEDLLSYAWKLWKKGTPLELLDPSLRDSYSRNQVIKCIHMSLLCVQESQAQRPTVQSILVMLGSDSVTLPDPEEPAFFVDHSGPNSNKPAIIDGNKSDQSTSGSVQWSVDKDPITDLYPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00502 659 CDD STKc_IRAK 336 601 - -
Accr11g00502 659 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Accr11g00502 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 298 405 - -
Accr11g00502 659 Pfam Protein tyrosine and serine/threonine kinase 333 599 IPR001245 GO:0004672|GO:0006468
Accr11g00502 659 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Accr11g00502 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 649 - -
Accr11g00502 659 Gene3D Transferase(Phosphotransferase) domain 1 406 608 - -
Accr11g00502 659 MobiDBLite consensus disorder prediction 619 659 - -
Accr11g00502 659 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00502 659 MobiDBLite consensus disorder prediction 627 648 - -
Accr11g00502 659 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Accr11g00502 659 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Accr11g00502 659 SUPERFAMILY Protein kinase-like (PK-like) 312 620 IPR011009 -
Accr11g00502 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Accr11g00502 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 131 - -
Accr11g00502 659 Gene3D - 26 130 IPR038408 -
Accr11g00502 659 Gene3D - 140 244 IPR038408 -
Accr11g00502 659 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Accr11g00502 659 ProSiteProfiles Protein kinase domain profile. 330 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00502 659 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Accr11g00502 659 FunFam Cysteine-rich receptor-like protein kinase 10 141 244 - -
Accr11g00502 659 Gene3D Phosphorylase Kinase; domain 1 293 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00502 Accr-Chr11 7680386 7683284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00502 34 659 Receptor kinase-like Gene Family AT4G05200 50.231 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00502 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00502 - - vvi:100257888 689.108