Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00501 ATGATTCGCTTCCTGAATTCTATCACGCCATTTCTGCTCTTTTGTCTTGTAATCCTTTTGTTTCCTAGAATCATCAAAGGACAGCAATATTGTTTAGGCACAACTTATGCCCCGAACAGCACATACCACACAAATCTTATTCGCTTACTTTCTTCCCTTTCCTCAAACGCCATTCGAAGTAATGGATTTTACAACACCACCGTCGGACAAAACAGCGATAACACCGTCTACGGCCTCTTCCTCTGCCGTGGAGACGTCACCATTGCGGCTTGTGACAGATGCGTTTCCACAGCAATCAAAGATATCACAACCCCTCAGAAATGCCCCAATACTACACAAGCCGTGGGTTGGTACCGCTACGAGTGCATGATACGATACTCCGACACGTATATCTTCTCCGTAGAAGATGCCAACCCCTTGGGTATCTTTCATAACATCGCTAATGCAACAGACCAAAGGGGTTTTATGAAACTGGTGCTTGATACCCTGAATGCGGTGGCCAAACAAGCTGCGTATGGTGGCGGTGGCAAGAAATTTGCGACCAAAGAAGTAAACTATAGCTATTTTCAAACTATATATTCTATGGTGCTGTGCACGCCGGATTTATCTCCAGATGATTGTTATACCTGTTTTAGAGGATTAACTGCACAGTACCAGACTTGCTGTTTTGGGAAGATAGGGGGAGTAGTTCTTGCCGCCAGTTGTACTGTAAGGTATGAAGTGTACCCCTTTTATAGAATCACTTTGCCACCGCCATCTCCTCCACCAATGCTGCCGCCAGAGACCCCTCCCAATGATAGGAGAAAGATCTCAGGTGGGATAATTATGGCCATAGTTGTTCCAACAGTGATATTCATATTGCTTGTCTCTCTCTGCTTCTTCTGCCTGATCAAGAGGAGAGCAAAAAAGAAGGATTCCTCATTTCCCAAACAAAGTGATGTTGACATTTCTAGTGTAGAATCGCTGCAATTTGATTTGGATGTCATCAAATCAGCTACGAACAACTTCTCTCCTGACAATAAACTAGGTCAAGGAGGATTTGGTGAAGTATACAAGGGTATCCTACCTGGTGGACAAGAGTTGGCTGTGAAGAGGTTATCAATTAGCTCCAAACAAGGTGTAGAACAATTTAAAAATGAAGTTGTTACTATGGCAAAACTTCAACATAGAAATCTTGTAAGGCTACTAGGATTCTGCTTGGATGAGGAGGAAAAGATACTCATATATGAATTTCTGCCCAAAAAAAGCCTGGATAGATTTCTCTTTGAACCTGGAAATAGAGGCGAATTGAATTGGTCAAAGCGTTATAAGATTATTGAAGGCATTGTAAGGGGGTTGCTTTATCTTCACGAAGATTCTCGACTCAAAATTATCCACCGTGACCTCAAAGCTAGTAATGTATTGTTGGACGAAAATTGGAATCCAAAAATTTCTGATTTTGGTATGGCCAGAATTTTTGGAGTCGATCAATCCCAAGCAGACACGAGTAGAGTCATGGGTACATATAGTTATATGGCTCCAGAATATGCTATGCATGGTCAGATTTCAGTCAAATCCGATATATATAGTTTTGGTGTCTTGACCCTTGAGATTATCTCTGGCAAAAAGAATACATCTTTCTACATATCAAGTTGTGCTGAAGACTTGTTAAGCTATGCTTGGAAGCTGTGGAAGAAAGGGACGCCATTAGAATTGCTGGATCCTAGTCTAAGAGATTCTTATTCAAGAAACCAAGTCATTAAATGCATTCATATGAGCTTGTTGTGTGTTCAGGAAAGCCAAGCTCAGAGACCTACAGTACAATCCATTTTGGTGATGTTAGGTAGTGACTCTGTGACCCTACCAGACCCTGAAGAGCCAGCATTTTTTGTCGATCATAGTGGACCAAATTCAAACAAACCCGCCATAATTGATGGAAACAAGTCCGATCAATCAACAAGCGGGTCTGTGCAATGGTCTGTGGATAAAGATCCGATTACTGACTTATACCCTCGCTAG 1998 0.4199 MIRFLNSITPFLLFCLVILLFPRIIKGQQYCLGTTYAPNSTYHTNLIRLLSSLSSNAIRSNGFYNTTVGQNSDNTVYGLFLCRGDVTIAACDRCVSTAIKDITTPQKCPNTTQAVGWYRYECMIRYSDTYIFSVEDANPLGIFHNIANATDQRGFMKLVLDTLNAVAKQAAYGGGGKKFATKEVNYSYFQTIYSMVLCTPDLSPDDCYTCFRGLTAQYQTCCFGKIGGVVLAASCTVRYEVYPFYRITLPPPSPPPMLPPETPPNDRRKISGGIIMAIVVPTVIFILLVSLCFFCLIKRRAKKKDSSFPKQSDVDISSVESLQFDLDVIKSATNNFSPDNKLGQGGFGEVYKGILPGGQELAVKRLSISSKQGVEQFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPKKSLDRFLFEPGNRGELNWSKRYKIIEGIVRGLLYLHEDSRLKIIHRDLKASNVLLDENWNPKISDFGMARIFGVDQSQADTSRVMGTYSYMAPEYAMHGQISVKSDIYSFGVLTLEIISGKKNTSFYISSCAEDLLSYAWKLWKKGTPLELLDPSLRDSYSRNQVIKCIHMSLLCVQESQAQRPTVQSILVMLGSDSVTLPDPEEPAFFVDHSGPNSNKPAIIDGNKSDQSTSGSVQWSVDKDPITDLYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00501 665 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Accr11g00501 665 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Accr11g00501 665 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00501 665 Gene3D Transferase(Phosphotransferase) domain 1 412 614 - -
Accr11g00501 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 655 - -
Accr11g00501 665 Gene3D - 140 244 IPR038408 -
Accr11g00501 665 Gene3D - 26 130 IPR038408 -
Accr11g00501 665 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Accr11g00501 665 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Accr11g00501 665 MobiDBLite consensus disorder prediction 625 665 - -
Accr11g00501 665 SUPERFAMILY Protein kinase-like (PK-like) 311 607 IPR011009 -
Accr11g00501 665 CDD STKc_IRAK 342 607 - -
Accr11g00501 665 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00501 665 MobiDBLite consensus disorder prediction 633 654 - -
Accr11g00501 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Accr11g00501 665 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Accr11g00501 665 Pfam Protein tyrosine and serine/threonine kinase 339 605 IPR001245 GO:0004672|GO:0006468
Accr11g00501 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 131 - -
Accr11g00501 665 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Accr11g00501 665 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Accr11g00501 665 FunFam Cysteine-rich receptor-like protein kinase 10 298 411 - -
Accr11g00501 665 FunFam Cysteine-rich receptor-like protein kinase 10 141 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00501 Accr-Chr11 7680386 7683284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00501 34 665 Receptor kinase-like Gene Family AT4G05200 50.385 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00501 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00501 - - qsu:112036327 696.812