Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00499 ATGATTCGCTTCATGGATTCTATCATGCCATTTCTGCTTCTTTGTCTTGTAATCCTTTTGTTTCCTAGAATCATCAAAGGACAGGTCATTTGTTCTGGCCCAACTTATTCCCCGAACAGCACATACCACTCAAATCTCAATCGCTTACTGTCTTCCCTTTCCTCAAACGCCATTCAAAGGGATGGATTTTACAACACTACCGTCGGACAAAACAGCGACTCCACCGTCTATGGCCTTTTTCTCTGCCGCGGGGACGCCACTGTCCCGGATTGTCAAGAATGTGTTTCCGATGCAATCAAAGACATCAAAATGCCTCAGAATTGCCCCAATACTACACAAGCCGTAGGTTGGTATGACAAGTGCATGATCCGATACTCCAATACGTATTTCTTCTCCATAGAGCAAGATAACCCCACGGGCATCGCGTACAACGTCGCCAACGCTACAGACCCCACCAGCTTTATGAAACTGGCGGTTGATACCCTGAGAGCGGTGGCAAAACAAGCGGCGTACGGCGGCGGCAGCAAGAAATTTGCAACTAAAGAAGCAAACTTTAGCGATTTTGAAACTATATATTCTATGGGACAGTGCACGCCGGATATATCTGCAGATGAATGTTATAACTGTCTGAGAAAAACAAGTGCAGAGTACCCGAGTTGCTGTTTTGGGAAGGTCGGTGGAGTAGTCCGTGCTCCCAGTTGTAATGTAAGGTATGAAGTGTACCCCTTTTATGGAGTGACTTTGCCGCGATCCCCACCACCATATCAACCACCGCCAGAGACCCCTTCCAATGATAAAAGCAAGATTTCAGATAGGGGAAAGAACTCAGCTGGGACAATTATGGCCATAGTGGTTCCAACAGTGATATTTATATTGCTTGTCTCCCTCTGCTTCTTCTGCCATGTTAAAAGGAGAGCTAAAAAGAATGATTCCTCATTTCCCCAAGAAAGTGATGTTGACATTTATAGTGTAGCATCTCTGCAATTTGATTTGGCTGTCATCAAATCAGCCACGAACAACTTCTCTCCTGACAATAAACTAGGTCAAGGAGGATTTGGCGAAGTATACAAGGGTATCCTATCTAGTGGACAAGAGTTAGCTGTCAAGAGGTTATCAAGTAGCTCCAAACAAGGTGTAGAACAATTTAAAAATGAAGTTGTTACTATGGCAAAACTTCAACATAGAAATCTTGTAAGGCTATTGGGATTCTGCTTGGATGCGGAGGAAAAGATACTCATATATGAATTTTTGCCCAAAAAAAGCCTAGATAGATTTCTCTTTGAACCTGGAAACAGAGGTGAATTGAATTGGTCAAAGCGTTATAAGATTATTGAAGGCGTTGCAAGGGGGTTGCTATATCTTCATGAAGATTCTCGACTCAAAATTATACACCGTGACCTCAAAGCTAGTAATGTATTGTTGGATGAAATTTGGAATCCAAAAATTTCTGATTTTGGTATGGCTAGGATTTTTGGAGTTGATCAATCCCAAGCAGATACAAGTAGAGTCGTGGGTACATATGGTTACATGGCTCCAGAATATGCCATGCATGGTCAAATTTCAGTCAAATCTGATATATATAGTTTTGGTGTCTTGACCTTAGAGATTATCTCGGGCAAAAAGAATACATCTTTCTACATATCAAGTGTTGCTGAAGACTTGTTAAGCTATGCTTGGAAGCTGTGGAAGAAAGGGACGCCATTAGAATTGCTGGATCCTAGTCTAAGAGATTCTTATTCAAGAAACCAAGTCATTAAATGCATTCATATGAGCTTGTTGTGTGTTCAGGAAAGCCAAGCTCTGAGGCCTACAATACAATCCATTTTGGTGATGTTAGGTAGTGAATCTGTGACCCTACCAGACCCTGAAGAACCAGCATTTTTTGTCGATCATAGTGGAATAGATTCAAACAAAGCCGCCATAATTGATGGAAATAGGTCCGATCAATCAACAAGTGGGTCTGTGCAATGGTCTGTGGATAAAGATCCGATTACTGACTTATACCCTCGCTAG 2013 0.4213 MIRFMDSIMPFLLLCLVILLFPRIIKGQVICSGPTYSPNSTYHSNLNRLLSSLSSNAIQRDGFYNTTVGQNSDSTVYGLFLCRGDATVPDCQECVSDAIKDIKMPQNCPNTTQAVGWYDKCMIRYSNTYFFSIEQDNPTGIAYNVANATDPTSFMKLAVDTLRAVAKQAAYGGGSKKFATKEANFSDFETIYSMGQCTPDISADECYNCLRKTSAEYPSCCFGKVGGVVRAPSCNVRYEVYPFYGVTLPRSPPPYQPPPETPSNDKSKISDRGKNSAGTIMAIVVPTVIFILLVSLCFFCHVKRRAKKNDSSFPQESDVDIYSVASLQFDLAVIKSATNNFSPDNKLGQGGFGEVYKGILSSGQELAVKRLSSSSKQGVEQFKNEVVTMAKLQHRNLVRLLGFCLDAEEKILIYEFLPKKSLDRFLFEPGNRGELNWSKRYKIIEGVARGLLYLHEDSRLKIIHRDLKASNVLLDEIWNPKISDFGMARIFGVDQSQADTSRVVGTYGYMAPEYAMHGQISVKSDIYSFGVLTLEIISGKKNTSFYISSVAEDLLSYAWKLWKKGTPLELLDPSLRDSYSRNQVIKCIHMSLLCVQESQALRPTIQSILVMLGSESVTLPDPEEPAFFVDHSGIDSNKAAIIDGNRSDQSTSGSVQWSVDKDPITDLYPR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00499 670 SUPERFAMILY Protein kinase-like (PK-like) 318 612 IPR011009 -
Accr11g00499 670 ProSiteProfiles Gnk2-homologous domain profile. 24 130 IPR002902 -
Accr11g00499 670 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Accr11g00499 670 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Accr11g00499 670 MobiDBLite consensus disorder prediction 251 273 - -
Accr11g00499 670 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00499 670 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Accr11g00499 670 Pfam Salt stress response/antifungal 31 127 IPR002902 -
Accr11g00499 670 Gene3D - 139 243 IPR038408 -
Accr11g00499 670 Gene3D - 27 130 IPR038408 -
Accr11g00499 670 MobiDBLite consensus disorder prediction 645 659 - -
Accr11g00499 670 Pfam Protein tyrosine and serine/threonine kinase 344 609 IPR001245 GO:0004672|GO:0006468
Accr11g00499 670 SMART serkin_6 341 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00499 670 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 303 416 - -
Accr11g00499 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Accr11g00499 670 MobiDBLite consensus disorder prediction 645 670 - -
Accr11g00499 670 CDD STKc_IRAK 347 612 - -
Accr11g00499 670 Gene3D Phosphorylase Kinase; domain 1 301 416 - -
Accr11g00499 670 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Accr11g00499 670 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Accr11g00499 670 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Accr11g00499 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 660 - -
Accr11g00499 670 FunFam cysteine-rich receptor-like protein kinase 10 417 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00499 Accr-Chr11 7625581 7628574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00499 35 670 Receptor kinase-like Gene Family AT4G05200 50.463 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00499 PK_Tyr_Ser-Thr 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00499 - - vvi:100257888 713.761