Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00498 ATGAGTCAAGTTTTATGTTCCAAGTGCGAAACCGCACATTTGATCATCAGAAAATTAGTGATTCGCTTCATGAATAATTCTACAAAGGCCTTCCTGCTCCTTGCTCTCATAATCTGTTTGATTGCTAGAATCAACGGACAGGCGTCTCAGGTAGATTGCACAGGACCAACTTATGCCCCAAACAGTACCTACTACACTAATCTTATGCTCTTATTCACAACCCTTTCCCTTTCCTCCAACGCCACTTACATTGATGGCTTTTACCACACCACCGTCGGACAAAACACCAAAGACGCCGTCTACGGCCTCTACCTCTGCCGTGGAGACACCACGGCTTCCGCCTGTCAAGCATGTGTCTCCCAGGCAACCAAAGATATCATGCGATGCCCCAAAACGACACAAGCCGTTGGTTGGTACGACAAGTGCACGTTACGATACTCCAACGCCAATTTCTTCGCCATAGAGCAAGATGATCCTACGCTCGTCCTGTACAACAACGCCAACGCAACAAACAAGGAAAGCTTTATGCGACTGGTGATTAATACGATGAATGAGGTGGCAAAAGACGCCGCGTACGGCGGCGGCAACGGAAGCAGGAAATTTGCGACGAGAGAAGAGAACTATAGTTCTTTTCAAACTCTTTATACTCTGGCTCAGTGCATGCCGGATTTATCTGAAGCTGAATGTTATAACTGTTTGAGAAGAACAATTGATGAGTACCCGAGTTGTTGCTTTGGCAGGGTGGGGGCAATAGCACGCGCCTATAGTTGCAACGTAAGGTATGAATTGTATCCATTTTATGGCGTGGTTTCTTCGTCACTGCCTTCTCATCGTCCACCACCAGAGCCAGAGTTCATTCCCAAAGGTAAAAGTAATATTTCGGTTGTGACAATTATTGCCATAGCAGTTCAATCAGCGATACTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAAATGGAGAGCAAGGATGAATGCTTCACTTCCGAAAAATGTTGAGATTTCAAGTGTAGAGTCTCTACATTTTGATTTGGATGCCATCAAATCAGCCACAAACGACTTCTCCCCTGACAATAAACTAGGTGAAGGTGGATATGGCGAGGTGTACAAGGGTATTTTACCCAATGGACAAGAGCTAGCTGTAAAGAGGCTATCAAGTAGTTCCAAACAAGGTGTACCGGAATTTAAGAATGAAGTAGTTACAATGGCAAAACTTCAGCATAGAAATCTTGTAAGGTTTTTTGGTTTTTGTTTGCAAGAAGAAGAAAAGATACTGGTATATGAATATTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACCTGAAAACAAGGGTAAATTGAATTGGTCAAATAGAGTCAACATTATTGAAGGCATTGCAAGGGGAATAACTTATCTTCATGAAGATTCTCAACTCAAAATCATACATCGGGATCTCAAATCTAGCAATGTTCTGTTGGATGAAGATTTGAATCCAAAAATAGCTGATTTTGGTATGGCTAGAATTTTTGGAGCTGATCAAACTCAAGCCAATACAAGCAAAGTTGTTGGGACATTTGGCTACATGTCTCCTGAATATGCAATACATGGTCATATATCAGTCAAAACTGATATATACAGTTTTGGCGTCCTAATCCTGGAGATCATTAGTGGCAAGAAGAATACATCTTTCTATGCATCAAATTATGCTGAGAACTTGCTAACCTATGCGTGGAAGCTGTGGAGGGAGGGGACGCCATTAGAATTGCTGGATCCTAGTCTAAGAAATTCTTGTTCAGGAAATGAAGTTATCAAATGCATCCATATAAGCTTATTGTGTATCCAGGAAAATCCAGCTTTAAGGCCAACAATACAATCTATTATGGTGATGCTAAGTAGTCACACCATCACATTGTCAGATCCTCAAGAGCCCGCATTTTTGTTTATTGATCGCCAAAGAACAGATGCAAACAATCGAGCAATATTTTTTGAGAATAGTTCGGATCAATCTACAAGCAGGTCTATGCAACGGTCTGTGGATGAAGATCCAATTTCTGACTTGTTTCCTCGTTAG 2058 0.4179 MSQVLCSKCETAHLIIRKLVIRFMNNSTKAFLLLALIICLIARINGQASQVDCTGPTYAPNSTYYTNLMLLFTTLSLSSNATYIDGFYHTTVGQNTKDAVYGLYLCRGDTTASACQACVSQATKDIMRCPKTTQAVGWYDKCTLRYSNANFFAIEQDDPTLVLYNNANATNKESFMRLVINTMNEVAKDAAYGGGNGSRKFATREENYSSFQTLYTLAQCMPDLSEAECYNCLRRTIDEYPSCCFGRVGAIARAYSCNVRYELYPFYGVVSSSLPSHRPPPEPEFIPKGKSNISVVTIIAIAVQSAILILQVSLCFLCLKWRARMNASLPKNVEISSVESLHFDLDAIKSATNDFSPDNKLGEGGYGEVYKGILPNGQELAVKRLSSSSKQGVPEFKNEVVTMAKLQHRNLVRFFGFCLQEEEKILVYEYLPNKSLDNFLFGPENKGKLNWSNRVNIIEGIARGITYLHEDSQLKIIHRDLKSSNVLLDEDLNPKIADFGMARIFGADQTQANTSKVVGTFGYMSPEYAIHGHISVKTDIYSFGVLILEIISGKKNTSFYASNYAENLLTYAWKLWREGTPLELLDPSLRNSCSGNEVIKCIHISLLCIQENPALRPTIQSIMVMLSSHTITLSDPQEPAFLFIDRQRTDANNRAIFFENSSDQSTSRSMQRSVDEDPISDLFPR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00498 685 MobiDBLite consensus disorder prediction 661 685 - -
Accr11g00498 685 Gene3D - 160 266 IPR038408 -
Accr11g00498 685 Gene3D - 46 151 IPR038408 -
Accr11g00498 685 Gene3D Transferase(Phosphotransferase) domain 1 431 638 - -
Accr11g00498 685 SMART serkin_6 355 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00498 685 Pfam Salt stress response/antifungal 168 264 IPR002902 -
Accr11g00498 685 Pfam Salt stress response/antifungal 53 148 IPR002902 -
Accr11g00498 685 SUPERFAMILY Protein kinase-like (PK-like) 340 662 IPR011009 -
Accr11g00498 685 Pfam Protein kinase domain 358 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00498 685 ProSiteProfiles Gnk2-homologous domain profile. 157 266 IPR002902 -
Accr11g00498 685 FunFam Cysteine-rich receptor-like protein kinase 10 320 430 - -
Accr11g00498 685 FunFam Cysteine-rich receptor-like protein kinase 25 159 266 - -
Accr11g00498 685 ProSiteProfiles Protein kinase domain profile. 355 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00498 685 ProSiteProfiles Gnk2-homologous domain profile. 46 151 IPR002902 -
Accr11g00498 685 CDD STKc_IRAK 361 626 - -
Accr11g00498 685 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Accr11g00498 685 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 669 - -
Accr11g00498 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Accr11g00498 685 Gene3D Phosphorylase Kinase; domain 1 317 430 - -
Accr11g00498 685 FunFam cysteine-rich receptor-like protein kinase 10 431 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00498 Accr-Chr11 7606932 7610404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00498 57 685 Receptor kinase-like Gene Family AT4G05200 48.068 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00498 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00498 - - csin:114306417 682.945