Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00496 ATGCATTCTCCAAAACTCTTTCTTCTTCTTTGCCTTATAATCCTTTTCGGCAAAGGACTCACTGCCTACCCATGTTCGAGCACAACTTATGCTCAGAACAGCACATTTCAAACAAATCTTAATATCTTACTTTCTTCCCTTTCCTCCAACGCCAATAGAAGTGATGGAGTTTACAACACCACCGTCGTGGACTCCAACACCACCGTCTACGGACGCCTCCAGTGCCTCCGTGATGCCACTGTCCAGGCTTGTCAAAAATGTGTTTCCGATGGAATCAACGATCTCCTTGGGAGATGCCCCAATAATACAGGAGCCGTGGATTGGTACGACAACTGCTGGTTACGTTTCTCTGACCAGAATTTCTTCTCCAAAATGGAAGAAGACCCCATGACAATTGTTTATAACACCGGCAATGCAATAAACACGACTAGCTTTATGAACCTATTGGGTGAAACCTTGCAAGTGGTTGCGAAAGACACGTCGGAAGGTGGAAGCAAGAAATTTGCGACAAAAACAGTAGAATATAATGCTTTTCAAAATTTATATACTATGGCTCAGTGCACGTCCGATATATCTGAGACTGATTGTCACAACTGTCTCCGTAACAGTATTAGCAATTTGCCTACTTGCTGTAATGGAAAAGTAGGGGGTGTAACCCTCAAACCCAGTTGCTATTTAAGGTACGAAACGTACGTCTTTTACCAGGAAGCACCTCCGCCACCAGCTTCTTCACCGGAATCCACTTCCAAAGATAAAAGCAAGATTTCAGCTGGGATAATTCTTGCTATAGCTGTTCCAACTGTGATATTCATATTGCTAGCCACGCTCTGCTTCTTGTACATAAAAAGGAGACTGATGAAATATTCTTCAGTTCCAAAACAAACTGTTGATGTTTCAAGTGTAGAATCCCTACAATTTGATTTGGATACCATCAAATCGGCCACAAACGACTTCTCTCCAGACAATAAACTTGGGCAGGGAGGATTTGGTGAAGTATACAAGGGTATTCTACCTGGTGGACAAGAGTTAGCAGTTAAAAGACTATCAAGCACTTCAAAACAAGGAGTAGGAGAATTTAAGAATGAAGTTCTTACGATGGCAAAACTTCAACACAGAAATCTTGTAAGGTTACTTGGATTTTGTTTGGATGAAGGAGAAAAGATACTCATATATGAATATTTGGCCAACAAAAGCTTAGATAATTTCCTGTTCGGACTTGAAAACCAAGCTAAGTTGAATTGGTCAAATCGTTACAAGATTATTGAAGGTATTGCAAGGGGAATGCTCTACCTTCATGAGGATTCTCGACTAAAAATTATACATCGCGATCTCAAAGCTAGTAATGTATTGTTGGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGTATGGCTAAAATTTTTGGAGTTGATCAAACGCAAGCAAGCACAAGCAGAGTTGTTGGCACCTTTGGATATATGGCTCCTGAATATGCAATGCAAGGTCATATTTCAATCAAATCTGATATATATAGTTTTGGTGTCCTAATTCTTGAGATTATTAGTGGCAAGAAAAATACATCTTTCCATGTATCAAGTTATGCTGAAGACCTACTAAGCTATGCCTGGAAACTGTGGAGGGAAGGGACGCCATTGGAATTGCTGGATCCTAGTTTAAGAGATTCTTGTTCAAGAAATGAAGTTATTAAATGCATTCACATGAGCTTGTTGTGCATTCAGGAGAATCCAGCTCTAAGACCAACAATACAATCGATAATGGTGATGCTAAGTAGTAACTCCGTCACATTATCAGATCCTCAAGAGCCACCGTTTTATATTGGTCGTCATAGAACAGATTCAAACAATCCGGCCATTTATGAGAATAGGTCGGATCAATCCACAAGCAAGTCCGTGCAACGGTCTGTGGATGAAGATCCCATTACTGACTTGTATCCTCGCTAA 1941 0.4034 MHSPKLFLLLCLIILFGKGLTAYPCSSTTYAQNSTFQTNLNILLSSLSSNANRSDGVYNTTVVDSNTTVYGRLQCLRDATVQACQKCVSDGINDLLGRCPNNTGAVDWYDNCWLRFSDQNFFSKMEEDPMTIVYNTGNAINTTSFMNLLGETLQVVAKDTSEGGSKKFATKTVEYNAFQNLYTMAQCTSDISETDCHNCLRNSISNLPTCCNGKVGGVTLKPSCYLRYETYVFYQEAPPPPASSPESTSKDKSKISAGIILAIAVPTVIFILLATLCFLYIKRRLMKYSSVPKQTVDVSSVESLQFDLDTIKSATNDFSPDNKLGQGGFGEVYKGILPGGQELAVKRLSSTSKQGVGEFKNEVLTMAKLQHRNLVRLLGFCLDEGEKILIYEYLANKSLDNFLFGLENQAKLNWSNRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNVLLDEDLNPKISDFGMAKIFGVDQTQASTSRVVGTFGYMAPEYAMQGHISIKSDIYSFGVLILEIISGKKNTSFHVSSYAEDLLSYAWKLWREGTPLELLDPSLRDSCSRNEVIKCIHMSLLCIQENPALRPTIQSIMVMLSSNSVTLSDPQEPPFYIGRHRTDSNNPAIYENRSDQSTSKSVQRSVDEDPITDLYPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00496 646 SUPERFAMILY Protein kinase-like (PK-like) 303 611 IPR011009 -
Accr11g00496 646 FunFam Cysteine-rich receptor-like protein kinase 25 129 233 - -
Accr11g00496 646 SMART serkin_6 318 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00496 646 Gene3D - 18 121 IPR038408 -
Accr11g00496 646 Gene3D - 128 233 IPR038408 -
Accr11g00496 646 Gene3D Phosphorylase Kinase; domain 1 281 393 - -
Accr11g00496 646 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Accr11g00496 646 ProSiteProfiles Gnk2-homologous domain profile. 127 233 IPR002902 -
Accr11g00496 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Accr11g00496 646 ProSiteProfiles Protein kinase domain profile. 318 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00496 646 Pfam Salt stress response/antifungal 25 118 IPR002902 -
Accr11g00496 646 Pfam Salt stress response/antifungal 141 231 IPR002902 -
Accr11g00496 646 FunFam cysteine-rich receptor-like protein kinase 10 394 596 - -
Accr11g00496 646 Pfam Protein tyrosine and serine/threonine kinase 321 587 IPR001245 GO:0004672|GO:0006468
Accr11g00496 646 ProSiteProfiles Gnk2-homologous domain profile. 18 121 IPR002902 -
Accr11g00496 646 Gene3D Transferase(Phosphotransferase) domain 1 394 600 - -
Accr11g00496 646 MobiDBLite consensus disorder prediction 600 646 - -
Accr11g00496 646 MobiDBLite consensus disorder prediction 614 634 - -
Accr11g00496 646 FunFam Cysteine-rich receptor-like protein kinase 10 282 393 - -
Accr11g00496 646 CDD STKc_IRAK 324 589 - -
Accr11g00496 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00496 Accr-Chr11 7492709 7495857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00496 3 646 Receptor kinase-like Gene Family AT4G05200 47.704 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00496 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00496 - - tcc:108662469 679.863