Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00494 ATGAAGCTCTTCAAAACCAATCCTCCTCTCTCCGTTCTAATGATTTTCGTCATGATCCTTACGGTGATCGTAACCAGTTATAGAGCAGCAGCCCAATCTGAAGAATATCATTACTGTCAAAACACCACCTTTTTCTCTTCCAATAGCTCTTATCAAACCAATCTCAACCATCTCCTTTCATGGCTTTCTACAAATTCCACCCGCCAAAACGGTTTCTACTACACCACTGCCGGCGGAAACTCCAGCAACACCGTCTACGGGGCCTTCCTCTGCCGTGGAGACCTAACCCCCAACGACTGCCATGTCTGTGCTTCCACGGCAGCCAAACAAATACTCCAATCATGTCCGTTCGATCAAAAGTCAGTCATCTGGTACAACGAGTGTATGTTACGTTACTCAGACAAGCCTTTCTTCTCCTCCGATGAAGTAAACCCCAGGCTTGTTTATGTGAATACTGCGACTATGTCAAACCAGAGTGGCTTTATGTTGCTTTTGGGTGACACTATGAACGAGGTGGTGGCGCAAGCAGTGAAGGGTGGCGGAGCCGACAAGAAGTTTGCTACCAAAGAAGCCAATGTTTCTAGTTTTCAAACGCTGTACACGCTTGCACAGTGCACGCCGGACTTATCAGAAACTGCCTGCGACACATGCTTGAAACGAGCAACTTCGATCTTACCCAATTGCTGCAGTGGGACGATGGGGGCCAGAGTCCTACAAGCGAGTTGTATTTTCCGATATGAACTGTACCCGTTTTACCATTTATCGCCGGTGAATGCCTCACAAGAACCAACACCAAAAGGAAAAAACCGGAACTCTGTAGCCATAATCCTTGCGATTGTGGTTTCAATTGTGACTGTTTTGCTGCTTTTCTTTCTTCTCTGCTGGTTAGTATCTAGGAGATCAAGCAAGAAGTTCAAATCAGTGCCAGCTGAAGAAACTGATGTTGAAATTTCCAGTGTCGAGTACTTGCAATTTGATCTGGAAACAGTCAAATTGGCCACAAACAACTTCTGCCATGAAAACAAATTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGAACTCTTCCTAATGGGAAAAATATTGCAGTGAAGAGGCTTTCATTGAGCTCTAGGCAAGGTGCAGAAGAATTCAAGAATGAGGTGGTTTTAGTGGCCAAGCTTCAACACAGAAACCTTGTTAGGGTATTGGGATTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATCACCAACAAAAGCTTGGATCATTTTCTTTTTGATGTTGAAAGAAAAAGTATGCTTAATTGGCCAAAACGGTATAAGATCATAAAAGGAATTGCTCGTGGAATACTTTATCTTCATGAAGACTCTCGGCTTACAATCATACACCGTGATCTCAAAGCTGGTAATATATTATTAGATGAGGATTTCAATCCGAAAATTGCAGATTTTGGTATGGCAAAAATCTTTGATGTGGATCAAACTCAAGGAAATACAAATAGAATTGTGGGCACATACGGTTATATGCCTCCAGAGTATGCGATGCATGGACAGTTGTCCGTAAAAGTGGATGTGTACAGTTTTGGTGTGTTGATGTTGGAGATAATATGCGGACAAAAGAGCACATCCTTTCATGAATCCAACTATGATGAACATCTCTTGAACTATGCCTGGAGAAAGTGGAAAGATGGGACGCCATTGGAAGTGTTAGACATGAGTTTGAGAGATTCATATAACAGAGAGGAAGTGAGCAGATGTATACAGATTGCATTATCATGTGTACAAGAAGATCCAGCTCGAAGGCCAACAATGCAGACAATAGTTCTGATGCTCAACAGTTACTCAGTTAGTGTAGCAACACCTGAAAGGCCTCCATTGTTGGTTCAAAGCACAAGTGTTGAACCAAGACTTACGTTGGAATCAGCAGATAAGTCTTCTAATAAAAGCAAATCATCAGTCTCATACTCCATTGATGAAGCTTCCATCACTCAAGTGTACCCTCGTTAG 1998 0.4274 MKLFKTNPPLSVLMIFVMILTVIVTSYRAAAQSEEYHYCQNTTFFSSNSSYQTNLNHLLSWLSTNSTRQNGFYYTTAGGNSSNTVYGAFLCRGDLTPNDCHVCASTAAKQILQSCPFDQKSVIWYNECMLRYSDKPFFSSDEVNPRLVYVNTATMSNQSGFMLLLGDTMNEVVAQAVKGGGADKKFATKEANVSSFQTLYTLAQCTPDLSETACDTCLKRATSILPNCCSGTMGARVLQASCIFRYELYPFYHLSPVNASQEPTPKGKNRNSVAIILAIVVSIVTVLLLFFLLCWLVSRRSSKKFKSVPAEETDVEISSVEYLQFDLETVKLATNNFCHENKLGEGGFGEVFKGTLPNGKNIAVKRLSLSSRQGAEEFKNEVVLVAKLQHRNLVRVLGFCLDGEEKILIYEFITNKSLDHFLFDVERKSMLNWPKRYKIIKGIARGILYLHEDSRLTIIHRDLKAGNILLDEDFNPKIADFGMAKIFDVDQTQGNTNRIVGTYGYMPPEYAMHGQLSVKVDVYSFGVLMLEIICGQKSTSFHESNYDEHLLNYAWRKWKDGTPLEVLDMSLRDSYNREEVSRCIQIALSCVQEDPARRPTMQTIVLMLNSYSVSVATPERPPLLVQSTSVEPRLTLESADKSSNKSKSSVSYSIDEASITQVYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00494 665 Pfam Protein kinase domain 340 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00494 665 FunFam Cysteine-rich receptor-like protein kinase 25 145 251 - -
Accr11g00494 665 FunFam cysteine-rich receptor-like protein kinase 10 413 615 - -
Accr11g00494 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Accr11g00494 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 137 - -
Accr11g00494 665 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Accr11g00494 665 Gene3D Transferase(Phosphotransferase) domain 1 413 619 - -
Accr11g00494 665 SUPERFAMILY Protein kinase-like (PK-like) 321 634 IPR011009 -
Accr11g00494 665 Gene3D - 32 137 IPR038408 -
Accr11g00494 665 Gene3D - 146 251 IPR038408 -
Accr11g00494 665 SMART serkin_6 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00494 665 CDD STKc_IRAK 343 609 - -
Accr11g00494 665 Pfam Salt stress response/antifungal 156 249 IPR002902 -
Accr11g00494 665 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Accr11g00494 665 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00494 665 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Accr11g00494 665 FunFam Cysteine-rich receptor-like protein kinase 10 299 412 - -
Accr11g00494 665 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Accr11g00494 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 661 - -
Accr11g00494 665 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00494 Accr-Chr11 7466041 7468695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00494 4 665 Receptor kinase-like Gene Family AT4G05200 48.467 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00494 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00494 - - cit:127900229 710.294