Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00492 ATGATCTTCAAGATTATAATTTTCACACTCTTATTCATCGGCGTTTTGAATTCTTCTTCTGCTCAAGTCGTAGGTCGTAATGATCTTTACCCTCAATGCTCCACCGGCAACAACTTCACTGCCAATAGTACCTTCGAATCCAACCTCAGCACCCTATTCTCTTCCCTGACTTCAAACCTAACGGCCAACCTCGACTTCTACAACACCACCGTTGGCCGCGGTGGCGAGACCTTATACGGCCTCTTCATGTGCCTGGGCGCTATCAACCGAGATATATGCCGCAGCTGCGTCCGTAACTCAACGATAGAGTTAGGTGAAACATGCCAATTTTCGAAAGAGGCCGTAAACTGGTGGGACCCGTGCTTGGTTCGCTATTCCGACCGGAACTTCTTCTCCACCGTTGCCACAAGGCCTAGACTCCGCATGTTGAACCCCAACAATGTCTCAAACCAGGCAGGGTTCATGAATGTTTTGAGGACTATCATGAACACGACGGCAGATGAGGCGGCCAAGCCTGGTTTGATGAAGAAGAAGTTTGGGACGAATGCGACGACGGTGGAGTTTCAAACTCTGTATGTTCTGGTTCAGTGCACGCCGGACCTTTCGACGGCGGATTGCAAAAGGTGTCTGAGTGGTGTGATTGGGGACTTTACATGGTGTTGTGATGGGAAGATAGGAGGAAGAGTGCTATATCCAAGTTGCCTCGCTCGTTATGAATTGTATCAGTTCTTTAATTCTTCTACGCCTATTCGGCCAGTTCCACTGCCGCCTCCTCCGGCTCTGTTTCCTCCTCCAAATCCTGTAAAAAGGAGAAGCCGATTACGGACCATTGTGATAGCTGTGGTTACTCCTGTTGGAGCTGTGACACTTTTATGTTTGGCTTACTTTTTATTGAAGAATCAAATAAAGAAGATGCGTATGGCTTTTCTCATGCAAAAATACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACTATTGAAGCTGCAACAAATAAGTTTTCAAATGAGACTAGTTTAGGTCAAGGTGGATATGGACAAGTTTACAAGGGCATTCTTTCAAATGGTCAAGAAATAGCTGTAAAAAGGCTTTCAAAAAGTTCTAGTCAAGGAGTTGAAGAATTTAAGAATGAGGTTTTATTAATAGCCAGGCTCCAGCATAGAAATTTGGTGGCATTGCTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATACGTTCCCAACAAAAGTCTTGATTACTTTCTATTTGGTTCGGAAAAGGGCAAAGTATTAAATTGGGAGGAGCGTTATAAAATTATAGGAGGAGTTGCTCGAGGAATTCTCTACCTTCATGACTATTCTCGAGTTAAAATTATACATCGTGATCTCAAGCCTAGCAATATTTTATTAAATGATGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATGGTTGGAATCAATGAAATTGACAGAAATACAAGTAAAATTGTTGGAACATACGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAGAAATCAGACGTTTTTAGCTTTGGAGTAATAGTATTAGAAATTATTAGTGGACAGAAGATTACAAGTCATCCTAATCAATCTCATGGGCTCCTAAACTATGCTTGGAATCACTGGAAGGAAGAAAAGGTTTTGGAGATATTGGATTCAAATCTAAATGAATCTGAATCACTTGATGAAGTGAATAAGTGCGTCCAAATTGGGTTGTTATGTGTTCAAGAAGATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTCAGCAATGATTCAATTCAATTGCCATTTCCACAAGAACCTGCTTTCTTTCTGGAGGGCCAAATGGAGCTCAATACTGAAAGTAAAGAATCTATTAATGAAATGTCTACAAGTGACTTCTATCCTCGTTAG 1953 0.4132 MIFKIIIFTLLFIGVLNSSSAQVVGRNDLYPQCSTGNNFTANSTFESNLSTLFSSLTSNLTANLDFYNTTVGRGGETLYGLFMCLGAINRDICRSCVRNSTIELGETCQFSKEAVNWWDPCLVRYSDRNFFSTVATRPRLRMLNPNNVSNQAGFMNVLRTIMNTTADEAAKPGLMKKKFGTNATTVEFQTLYVLVQCTPDLSTADCKRCLSGVIGDFTWCCDGKIGGRVLYPSCLARYELYQFFNSSTPIRPVPLPPPPALFPPPNPVKRRSRLRTIVIAVVTPVGAVTLLCLAYFLLKNQIKKMRMAFLMQKYFGSESNTLEPLQFSLATIEAATNKFSNETSLGQGGYGQVYKGILSNGQEIAVKRLSKSSSQGVEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFLFGSEKGKVLNWEERYKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLNDEMNPKISDFGMARMVGINEIDRNTSKIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGQKITSHPNQSHGLLNYAWNHWKEEKVLEILDSNLNESESLDEVNKCVQIGLLCVQEDPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGQMELNTESKESINEMSTSDFYPR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00492 650 CDD STKc_IRAK 345 608 - -
Accr11g00492 650 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 645 - -
Accr11g00492 650 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Accr11g00492 650 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Accr11g00492 650 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Accr11g00492 650 SMART serkin_6 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00492 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Accr11g00492 650 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 301 414 - -
Accr11g00492 650 SUPERFAMILY Protein kinase-like (PK-like) 322 633 IPR011009 -
Accr11g00492 650 Gene3D - 138 243 IPR038408 -
Accr11g00492 650 Gene3D - 27 130 IPR038408 -
Accr11g00492 650 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Accr11g00492 650 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Accr11g00492 650 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 415 616 - -
Accr11g00492 650 ProSiteProfiles Protein kinase domain profile. 339 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00492 650 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
Accr11g00492 650 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Accr11g00492 650 Pfam Protein kinase domain 340 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00492 650 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Accr11g00492 650 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00492 Accr-Chr11 7412558 7417600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00492 29 625 Receptor kinase-like Gene Family AT4G05200 45.395 3.35e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00492 Pkinase 5.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00492 - - pcin:129286093 1006.51