Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00490 ATGGATATGCCATTTCTGAAACTAGTGGTATCCTATTTTGTGCTCCTCACCTCCTTCAATGTCGCCTCTTCTCAAGTAGACATCCCTGCTTACTATGACCACAACTGCACTAATAACAACTTCACTTCCGAGAGCCCCTACCTGTTCAACCTTTACTCTCTTTTAATGTCCTTGTATTCCAAGGCCACCGCCACTGATACTACTGCAAAGTTCTACAACGACATCGTGGGCACCCCAAACATGAACGACACAGTATATGGAGAGTACATGTGCCGAGGCGACGTCCCGATGGAGGTGTGTCGAGATTGTGTTCAGGACGCCACAAGTCGAATAGCCTCAGAGTGTCCATACATCAGAGAAGCTATCATCTGGTACGACCAGTGCTCTGTTCGCTACTCCGACCGTTATTTCTTCTCCACCCTCCACCAACTACCTATTGTTGACAGCTTTTTGCGTGACACCGGAAGCGGCGGAACCGGTGGCTACTGTGACCGCGGAGGACTAACATTGTTAAGCGGTGGTGGAGGCGGAGGATGCGGGAAAAAAAGCGAGACTATTCCTACGGGCGTCTCGGAAAGCGAATATATAGAATTAAGTCAGACGCTGAATTACGCGGTGGTGGAGGCAAAGACATCTACCAAGAGATTTGCAACAAAAGAAGCAAAATTGACTATTGGTGGATCGCGGTACGCTCTTGTACAGTGCACGCCGGATCTGTCCCCACAATTATGTAGCGAGTGTCTATATGGCTTGATCGATCGTATTCCAATCAACTATACTGGAAGCAGTGGAAGAATTCTTAATCCCAGCTGCAATTGGAGATCCGAAGGATACCAATTTTATTATAAGGGCAACCAGCCTCCCAGTGATTTTACTGTGTCCGAAAGTCCAAGTCTTGCAGTAGGCTGGAATTGCTCGACTACCAAAGCCAACTATACTACCAATGATCCCTACCTAAACAACCTCGGAAATCTCTTTGAACATCTCTCAAAGTCATCCAACATCACCAACAACAAAGGATTCTATAGCACCATGGTAGGAAACAAGTCCAACACCGTCTACGGCCTCTTCATGTGTCGGGGTGATGTGTCCCTTCAGCTCTGCAGTGAATGTGTCAGTAAGGGAATCAAGCGACTAAACAATACGTGTTCCTCTTCAAAGGAGGCCATCATTTGGTATGATATGTGCATGCTTCGCTATTCCAATCGCTCTTTCTTCTCTACCCTAGACACCCAACCTATGATTACCTCAAGTGGTGTGGAATTGCTTCAAATCCAAAAAGAGGGCTTCATTCGGCTACTAGTGAATACATTGAGTGATCTAATGACGGCGACAACGAACTCAACGCCTATAGGAGTAAAGAATTTTGCAACAAAAACAGTATTCAGCCCTTCAGAGTTTAGAACGTTGTATACTCTTGCACAATGTACCCCAAACCTCACCAACCAAAATTGCAAAAAATGTCTGAATGATGCTCAACACCAAATCACGTCATGTTGTCTTGGAACAATAAGCGGAAAAGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATTATACCGTTTTTATAATAATTACAATCTAAGTGCTGTTTCAGTGCCTCCAGCTTATCCCCCAAATAATAGTGGTGTTTCAGTAATTACAGGAAAAAACGAAAACAACTCACGAACACTCATAATAGCGGTGTCCCTTAGTATTGTCTCGATCACGCTTTTTTGTTTCAGCATTTATTACTGGAAGAGAAAAAAGAACCAGCTGAATCATAAGGCGATTCTGGAGAAAAATTTTGGAAGTGTAGGGGCAACATTAGAGTCATTGCAATTCAATTTTGCAACAATTGAATCTGCAACAGATAAGTTCTCCATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCGTTCTTTCTGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTAATAGAATTCAAGAATGAGGTTATACTAATTGCCAAACTTCAACATAGAAACCTGGTGGCTTTGTTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTTTATGAATATGTTCCCAACAAGAGCCTCGATTACCTTTTATTTGGTTCGCAAAAGTCAAGAGAGTTGAATTGGCCTGAGCGTTATAAAATTATAGAAGGAATTGCTCGAGGAATTCATTACCTCCATGAACATTCACGCCTTAAAGTAATACATCGAGATCTTAAACCTAGCAATATTTTGTTAGATGGTGAGATGAATCCAAAAATTTCTGATTTTGGAATGGCAAGAATGGTTGGTATTAATGAAACCAGAGGGAGCACAAATAGAATTGTTGGAACATTGGGGTACATGTCTCCAGAATATCTTAAATTTGGACTATTTTCTGAGAAATCAGATGTTTTCAGCTTTGGAGTCATTGTTTTGGAAATTATAAGTGGAAAGAATATACATTCTGACAGTGAATCTCATGAATCTCAGTATGGTGGTGGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGGTGAAAATTTGATAGCCATATTGGATTCAAATCTGAGAGAAGAAACAGGGTCACACAGTGAAATAATGAGATGTATCCAAATCGGCTTGTTGTGTGTTCAAGGAAATCCACAAGTTAGGCCTTCCATGAATAAAGTTGTTAAATATCTAAGTAATGATTCAATGAAATTGCCAATTCCTCATGAACCAGCATTCTTCTTGCATAGTCAAATGGAAGGAGCAGAAACCAATAGAGCAATGGAGGCTCAACTTGCCAACCAAGATCAAAATTCCATCAATGAAATATCAGAGAGTGTATCATTTCCTCGCTAG 2847 0.4145 MDMPFLKLVVSYFVLLTSFNVASSQVDIPAYYDHNCTNNNFTSESPYLFNLYSLLMSLYSKATATDTTAKFYNDIVGTPNMNDTVYGEYMCRGDVPMEVCRDCVQDATSRIASECPYIREAIIWYDQCSVRYSDRYFFSTLHQLPIVDSFLRDTGSGGTGGYCDRGGLTLLSGGGGGGCGKKSETIPTGVSESEYIELSQTLNYAVVEAKTSTKRFATKEAKLTIGGSRYALVQCTPDLSPQLCSECLYGLIDRIPINYTGSSGRILNPSCNWRSEGYQFYYKGNQPPSDFTVSESPSLAVGWNCSTTKANYTTNDPYLNNLGNLFEHLSKSSNITNNKGFYSTMVGNKSNTVYGLFMCRGDVSLQLCSECVSKGIKRLNNTCSSSKEAIIWYDMCMLRYSNRSFFSTLDTQPMITSSGVELLQIQKEGFIRLLVNTLSDLMTATTNSTPIGVKNFATKTVFSPSEFRTLYTLAQCTPNLTNQNCKKCLNDAQHQITSCCLGTISGKVMNPSCNLRFELYRFYNNYNLSAVSVPPAYPPNNSGVSVITGKNENNSRTLIIAVSLSIVSITLFCFSIYYWKRKKNQLNHKAILEKNFGSVGATLESLQFNFATIESATDKFSIENRIGKGGFGEVYMGVLSDGSKIAVKRLSENSSQGLIEFKNEVILIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYLLFGSQKSRELNWPERYKIIEGIARGIHYLHEHSRLKVIHRDLKPSNILLDGEMNPKISDFGMARMVGINETRGSTNRIVGTLGYMSPEYLKFGLFSEKSDVFSFGVIVLEIISGKNIHSDSESHESQYGGGLLSDAWKHWRGENLIAILDSNLREETGSHSEIMRCIQIGLLCVQGNPQVRPSMNKVVKYLSNDSMKLPIPHEPAFFLHSQMEGAETNRAMEAQLANQDQNSINEISESVSFPR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00490 948 SMART serkin_6 620 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00490 948 ProSiteProfiles Protein kinase domain profile. 620 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00490 948 ProSiteProfiles Gnk2-homologous domain profile. 29 137 IPR002902 -
Accr11g00490 948 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Accr11g00490 948 Gene3D Phosphorylase Kinase; domain 1 580 695 - -
Accr11g00490 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Accr11g00490 948 Gene3D - 29 137 IPR038408 -
Accr11g00490 948 Gene3D - 186 280 IPR038408 -
Accr11g00490 948 Gene3D - 300 405 IPR038408 -
Accr11g00490 948 Gene3D - 425 522 IPR038408 -
Accr11g00490 948 Gene3D Transferase(Phosphotransferase) domain 1 696 903 - -
Accr11g00490 948 SUPERFAMILY Protein kinase-like (PK-like) 604 895 IPR011009 -
Accr11g00490 948 ProSiteProfiles Gnk2-homologous domain profile. 300 405 IPR002902 -
Accr11g00490 948 FunFam cysteine-rich receptor-like protein kinase 10 696 902 - -
Accr11g00490 948 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 299 405 - -
Accr11g00490 948 Pfam Salt stress response/antifungal 428 520 IPR002902 -
Accr11g00490 948 Pfam Salt stress response/antifungal 305 402 IPR002902 -
Accr11g00490 948 Pfam Salt stress response/antifungal 36 134 IPR002902 -
Accr11g00490 948 Pfam Salt stress response/antifungal 192 276 IPR002902 -
Accr11g00490 948 ProSiteProfiles Gnk2-homologous domain profile. 174 280 IPR002902 -
Accr11g00490 948 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 304 944 - -
Accr11g00490 948 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 580 695 - -
Accr11g00490 948 ProSiteProfiles Gnk2-homologous domain profile. 411 522 IPR002902 -
Accr11g00490 948 Pfam Protein kinase domain 621 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00490 948 CDD STKc_IRAK 626 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00490 Accr-Chr11 7200446 7205363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00490 312 948 Receptor kinase-like Gene Family AT4G05200 42.748 1.46e-167 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00490 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00490 - - pcin:129286968 862.062