Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00489 ATGGATATGTCATTTCTGAAACTAGTGGTATCCTATTTTGTGCTTCTCACCGCCTTCAATGTCGCTTCTTCTGACGAAGACATCCCTGCTTACTATGACCACAACTGCACCATTGAGAACAACTTCACTTCCGATAGCCCCTACCAGTTCAACCTCATCACTCTTTTAACATCCTTGTATTCCAAGGCCAACGCCACTGATAATCAGTTCTACAATGCCACCGTTGAAGCCGATACCGACGCCGTATATGGAGAGTACATGTGCCGAGGCGACGTCCCCATGGAGGTGTGTCAAACTTGCGTTCAGGACGCAACAAGTCGAATAGCCTCAGAGTGTCCCTACAACAGAGAGGCCATCATCTGGTACGATCAGTGCTATGTTCGCTACTCCGACCGTTATTTCTTCTCCACCCTCCATCAACTACCTAATGTTATCAGCTTTTTCACCGATGACGACTGTTCCAGGAGACTAACACCAATAAAATGCAAGATGATTCAGTCAACTGGATTCATGATTCCACGCATCTCGGGAAGCCAATTAAATCTGACGCTGAATAATGCGGTGGTGGAACTGGAGGCAGAGACATCTAACAAGAGATTTGCAACAAAAGCAGCAAACTTGACTCTTCGTGACAAGCTGTACACTCTTGTACAGTGCACGCCAGATCTGTCCCCCCAATTCTGTAGTAAGTGTCTATATGGCTTGATCAAACTTATTCCAAGCAACGATACTGTTCTCGGAGGAAGAATTCTTAATCCCAGCTGCAATTTGGGATTCCGAGGATACCGATTTTATTATAAGGGCAACCTGCCTCCCAGTGTTTTTATCTATAAAGAGATTGGACGTCCAACTTTCACAGGCTACAACTGCTCGGCCACGGAAAACTTCAAGGCCAACGGTCTCTACCTAAACAACCTCAGGAGTCTCACTCTCAGTCTTAGCATCATGTCATCCATCAACAACACCGATGGATTCTACAGAACCTTCGTTGGAGACAAGTCCAACACCGTCTACGGCCTCTTCATGTGTCGGGGTGATGTACCCGTTGAGCTCTGCCATGAATGCGTCAATGAGGGAATCGATCAGCTAAACTCTTCGTGTCCTTCTTCAAAAGAAGCTATCATTTGGTATGATACGTGCATGCTTCGCTATTCCAATCGCTCTTTCTTCTCAACCCTAGACACACAACCTACCTATACAAAACCTGGTGCGGATAAGCTTCAAAGCCAAACAGAAGGCTTCAAACGGCTATTAGCGAGTTCATTGAATGATCTAGTGGAGGCGACACCCAATTCTGTGGGAGTGAAGAATTTTAAAACTAACAATGTACCAAGCCCTTCAGAGTTGACAACGTTGTATACTCTTGCTCAGTGTACTCCAACCCTGAATGGCCCAGATTGCAAAAAATGTCTACAGGGTGCTTTGGATCATATCAAGTCATGTTGTCTTGGAAAGAGAGGAGGACAAGCCATGAATCCTAGCTGCCACTTGAGGTTTGAATCTTATCTATTTTATTACAATCAAACTACTGCTGTTTCGGTGCCACCTGCGAATCCTCCAACTCCCGAAGTTTCAGAAAATGCAGGAAAACATAATGACCGCTCACGAACAATTATCATAGCGGTGTCCGTTACAGTTGTCACAATCATGCTACTTTGTTTCGGCTACTATTACTGGCTGAGGAAAAAGAGCAAGAGTTATAAGAACATTCTGAAGAAAAATTTTGGAAGTGAAGGAGCCATAGTAGAGTCATTGCAGTTCAGTTTCGCAACAATTGAAGCTGCAACAGATAAGTTTTCAATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCTGATGGTAGCAAAATTGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAAGGCTTATCAGAATTCAAGAATGAGGTTCTCCTCATTGCCAAACTGCAACACAGAAACTTGGTTGCATTATTAGGATTCTGCTTGAAAGATCAAGAGAAAATACTTGTTTATGAATATGTTCCTAACAAGAGCCTCGATTACTTTTTATTTAGTTCACAAAAGCCAAGAGAGTTAAATTGGCCAGAGCGTTATAAGATTATAGAAGGAGTTGCTCGAGGAATTCATTATCTTCATGAATATTCACGCCTTAAAGTAATACATCGAGATCTCAAACCAAGCAATATTTTGTTAGACGATGAGATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGGTTTGTATTAATGAAACTAGAGGAAGCACAAATAGAATTGCTGGAACAGTGGGCTACATCTCTCCAGAATACTTTAGATTTGGACTATTTTCTGATAAATCAGATGTATTCAGCTTTGGAGTTATTGTTTTAGAAATTATTAGTGGAAAAAGTATAAATTCTGAATCTGAATCTCGAGAATCTCAATATGAAGGTGGACTCTTAAATGAAGCTTGGAAGCATTGGAGGAATGAAGAATTGACAGCAATATTGGATTCAAATATGACAGAAGTAGTATCACACAGTGAAATAATGAAATGCATCCACATCGGCTTGTTGTGTGTTCAAGGAAATCCACAAATTAGGCCTTCCATGAATGAAGTTGTTCAATATCTAAGTAATGATTCAATGCATTTGCCAATTCCTCAAGAACCAGTATTCTTTATGTATAGTCAAATGGAACCAGCAGCAACCAATAGAGCAATAATGGAGGCTCAGCTTGCCAACCACAATCAATATTCAATCAATGAAATATCAGAGAGTCAATTATTTCCTCGCTAG 2784 0.4127 MDMSFLKLVVSYFVLLTAFNVASSDEDIPAYYDHNCTIENNFTSDSPYQFNLITLLTSLYSKANATDNQFYNATVEADTDAVYGEYMCRGDVPMEVCQTCVQDATSRIASECPYNREAIIWYDQCYVRYSDRYFFSTLHQLPNVISFFTDDDCSRRLTPIKCKMIQSTGFMIPRISGSQLNLTLNNAVVELEAETSNKRFATKAANLTLRDKLYTLVQCTPDLSPQFCSKCLYGLIKLIPSNDTVLGGRILNPSCNLGFRGYRFYYKGNLPPSVFIYKEIGRPTFTGYNCSATENFKANGLYLNNLRSLTLSLSIMSSINNTDGFYRTFVGDKSNTVYGLFMCRGDVPVELCHECVNEGIDQLNSSCPSSKEAIIWYDTCMLRYSNRSFFSTLDTQPTYTKPGADKLQSQTEGFKRLLASSLNDLVEATPNSVGVKNFKTNNVPSPSELTTLYTLAQCTPTLNGPDCKKCLQGALDHIKSCCLGKRGGQAMNPSCHLRFESYLFYYNQTTAVSVPPANPPTPEVSENAGKHNDRSRTIIIAVSVTVVTIMLLCFGYYYWLRKKSKSYKNILKKNFGSEGAIVESLQFSFATIEAATDKFSIENRIGKGGFGEVYMGILPDGSKIAVKRLSENSSQGLSEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFSSQKPRELNWPERYKIIEGVARGIHYLHEYSRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVCINETRGSTNRIAGTVGYISPEYFRFGLFSDKSDVFSFGVIVLEIISGKSINSESESRESQYEGGLLNEAWKHWRNEELTAILDSNMTEVVSHSEIMKCIHIGLLCVQGNPQIRPSMNEVVQYLSNDSMHLPIPQEPVFFMYSQMEPAATNRAIMEAQLANHNQYSINEISESQLFPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00489 927 ProSiteProfiles Gnk2-homologous domain profile. 284 389 IPR002902 -
Accr11g00489 927 ProSiteProfiles Gnk2-homologous domain profile. 159 264 IPR002902 -
Accr11g00489 927 SUPERFAMILY Protein kinase-like (PK-like) 583 902 IPR011009 -
Accr11g00489 927 SMART serkin_6 599 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00489 927 Pfam Protein tyrosine and serine/threonine kinase 601 873 IPR001245 GO:0004672|GO:0006468
Accr11g00489 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 560 674 - -
Accr11g00489 927 Pfam Salt stress response/antifungal 409 502 IPR002902 -
Accr11g00489 927 Pfam Salt stress response/antifungal 290 386 IPR002902 -
Accr11g00489 927 Pfam Salt stress response/antifungal 181 259 IPR002902 -
Accr11g00489 927 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Accr11g00489 927 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Accr11g00489 927 ProSiteProfiles Gnk2-homologous domain profile. 395 504 IPR002902 -
Accr11g00489 927 Gene3D - 168 264 IPR038408 -
Accr11g00489 927 Gene3D - 402 504 IPR038408 -
Accr11g00489 927 Gene3D - 30 134 IPR038408 -
Accr11g00489 927 Gene3D - 284 389 IPR038408 -
Accr11g00489 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Accr11g00489 927 ProSiteProfiles Protein kinase domain profile. 599 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00489 927 Gene3D Transferase(Phosphotransferase) domain 1 675 880 - -
Accr11g00489 927 Gene3D Phosphorylase Kinase; domain 1 561 674 - -
Accr11g00489 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 133 - -
Accr11g00489 927 FunFam cysteine-rich receptor-like protein kinase 10 675 880 - -
Accr11g00489 927 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Accr11g00489 927 CDD STKc_IRAK 605 873 - -
Accr11g00489 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 283 389 - -
Accr11g00489 927 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 208 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00489 Accr-Chr11 7116689 7121415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00489 283 927 Receptor kinase-like Gene Family AT4G05200 40.508 3.17e-165 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00489 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00489 - - pcin:129286968 842.032