Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00473 ATGGAGGGGAAGGTGCAGGACGTGTCACTGGGAGCCAACAAATTCTCAGAGAGGCAGCCCATCGGGACGGCGACTCAGAGTCTGGATGGAGGCAAGGACTATCAGGAACCGTCACTGACGCTGCTGTTTGAGCCATATGAGTTCACATCAAAGTCTTTCTATAAAGTCAGGATAGGTGAGTTTGTGGCTGCTTTTCTATTCCTTTATGTCGCCTTCTTGATGGTCAAAGGGGTGAGCAACTCCAAGTCCAAGTGCACAACCATCAGCATTCAAGGCATCGTATGGGCTTTTGGTGGCATGATCTTCTCCCTCATCTACTGCACGTTGGCATCTCAAGTCATCATCTGA 348 0.4971 MEGKVQDVSLGANKFSERQPIGTATQSLDGGKDYQEPSLTLLFEPYEFTSKSFYKVRIGEFVAAFLFLYVAFLMVKGVSNSKSKCTTISIQGIVWAFGGMIFSLIYCTLASQVII 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00473 115 Gene3D Glycerol uptake facilitator protein. 41 112 IPR023271 -
Accr11g00473 115 SUPERFAMILY Aquaporin-like 46 108 IPR023271 -
Accr11g00473 115 Pfam Major intrinsic protein 48 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g00473 115 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 108 IPR034294 -
Accr11g00473 115 MobiDBLite consensus disorder prediction 1 30 - -
Accr11g00473 115 MobiDBLite consensus disorder prediction 12 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00473 Accr-Chr11 6363555 6363902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00473 1 108 Major Intrinsic Protein MIP AT4G00430 60.185 5.44e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00473 K09872 - gmx:100775766 156.762