Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00467 ATGGCTTCTTCTCACAAAATTGTCTTACTCTTCTTCTTTATTGCCTTCCTCCTTTTTCCTCCAACCCAAGCACAGACTCATATCACTGACAATTGCTCTTCCAACAAAAACTTCACTGCCAATAGTGCTTTTCAATCCGACCGGGCCACACTCCTCTCTTCCTTAGCTTTCAACAACGCCATCGACTTCTACAACGACACTGCTGTCGGTAGGGGCGACACTGTCTATGGCCTCTTCATGTGTCGAGGTGACGTTACCCTCACGATGTGCCACCAATGCGTTGGCAATGCAACCCAAGGGTTACCTTCCGCGTGCCCAGTTTCAAAGGAGGCAATAGTTTGGTACGACGATTGCTTGGTTCGGTATTCTAATCGTTCCTTCTTCTCCACCGTTGCAATAAGGCCACGATTCGTCGGGTGGAACCCTGAAAATGTCTTTTTACCGGCAAGCTTCATGAGAACAGTGTACGATATTATGAACAAGACAGCAGATGAGGCTGCTAAACCTGCTGTGGGGCAAAAGAAGTATGCGAGCACCGCAAGGGGGGATATTTTGGCATTTCAGACTGTGTATTGCCTAGCTCAGTGTACACCGGACCTTTCGCCGTCGGATTGCAGATGGTGTCTAAGTGAAGCGATTAGGGACCTTAACTGGTGCTGTGATGGCAGGAAAGGAGGAAGAGTTCTGTATCCTAGCTGTAATGTTCGCTATGAATTGTACCGTTTCTATTTACCGGAAGCTCCAACACCAACTCCTACTCTGGCAATTGTTCCCCTCCCTGGTTCCCAAGTAATAGGAAAAGGTCAGTCAACAAGGACCGTTGTGATTGTTGTGGTTTCTTCGGTTGGTGGTTTCCTGATATTTGTTTGTCTTGTGTACTATCTCTTAAAGAGTCTAATAAAGACAAGACGCAACACTGTTCTCAGACAAAAATACTTTGGAAATGAAACCAACAATTTAGAGCCTCTGCGATTTAGTTTTGCCACTATTGAAGCTGCAACAAATAAGTTTTCACATGAAAACTGTTTAGGCCAAGGTGGATTTGGAAGAGTTTACAAGGGTGTTCTTTCAAACGGTCAAGAAGTAGCTATCAAGAGACTTTCAAAAAGTTCTGATCAAGGCGCAGAAGAATTCAAGAACGAGGTCTTATTAATTGCCAAACTCCAGCACAAAAATTTGGTAGCCTTGCTTGGATTTTGCATAGAAGAACGAGAGAAAGTTCTTATTTATGAATATGTTCCGAATAAAAGCCTTGACAACTTTCTATTTGGTTTGACTCTTCTAAACCCATTTTAA 1296 0.4375 MASSHKIVLLFFFIAFLLFPPTQAQTHITDNCSSNKNFTANSAFQSDRATLLSSLAFNNAIDFYNDTAVGRGDTVYGLFMCRGDVTLTMCHQCVGNATQGLPSACPVSKEAIVWYDDCLVRYSNRSFFSTVAIRPRFVGWNPENVFLPASFMRTVYDIMNKTADEAAKPAVGQKKYASTARGDILAFQTVYCLAQCTPDLSPSDCRWCLSEAIRDLNWCCDGRKGGRVLYPSCNVRYELYRFYLPEAPTPTPTLAIVPLPGSQVIGKGQSTRTVVIVVVSSVGGFLIFVCLVYYLLKSLIKTRRNTVLRQKYFGNETNNLEPLRFSFATIEAATNKFSHENCLGQGGFGRVYKGVLSNGQEVAIKRLSKSSDQGAEEFKNEVLLIAKLQHKNLVALLGFCIEEREKVLIYEYVPNKSLDNFLFGLTLLNPF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00467 431 ProSiteProfiles Protein kinase domain profile. 337 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00467 431 FunFam Cysteine-rich receptor-like protein kinase 25 135 242 - -
Accr11g00467 431 ProSiteProfiles Gnk2-homologous domain profile. 133 242 IPR002902 -
Accr11g00467 431 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 127 - -
Accr11g00467 431 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Accr11g00467 431 Pfam Salt stress response/antifungal 32 124 IPR002902 -
Accr11g00467 431 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 301 412 - -
Accr11g00467 431 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 10 248 - -
Accr11g00467 431 SUPERFAMILY Protein kinase-like (PK-like) 311 426 IPR011009 -
Accr11g00467 431 Pfam Protein tyrosine and serine/threonine kinase 340 422 IPR001245 GO:0004672|GO:0006468
Accr11g00467 431 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Accr11g00467 431 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Accr11g00467 431 ProSiteProfiles Gnk2-homologous domain profile. 26 127 IPR002902 -
Accr11g00467 431 Gene3D - 136 242 IPR038408 -
Accr11g00467 431 Gene3D - 24 127 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00467 Accr-Chr11 6121437 6125657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00467 7 423 Receptor kinase-like Gene Family AT4G05200 41.531 7.62e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00467 Stress-antifung 4.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00467 - - pcin:129286093 484.182